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Report for CCDS10636.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10636.1 Public Homo sapiens 16 SULT1A2 24 110 108 CCDS HistoryNCBI Gene:6799Re-query CCDS DB by CCDS ID:10636.1Re-query CCDS DB by GeneID:6799See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10636.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000335715.9 ENSP00000338742.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000335715.9Link to Ensembl Protein Viewer:ENSP00000338742.4Re-query CCDS DB by Nucleotide ID:ENST00000335715Re-query CCDS DB by Protein ID:ENSP00000338742
Original member Current member EBI ENST00000395630.5 ENSP00000378992.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000395630.5Link to Ensembl Protein Viewer:ENSP00000378992.1Re-query CCDS DB by Nucleotide ID:ENST00000395630Re-query CCDS DB by Protein ID:ENSP00000378992
Original member Current member NCBI NM_001054.4 NP_001045.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001054.4Link to Protein Sequence:NP_001045.2Re-query CCDS DB by Nucleotide ID:NM_001054Re-query CCDS DB by Protein ID:NP_001045Link to BLAST:NP_001045.2
Original member Current member NCBI NM_001400258.1 NP_001387187.1 Accepted alive Link to Nucleotide Sequence:NM_001400258.1Link to Protein Sequence:NP_001387187.1Re-query CCDS DB by Nucleotide ID:NM_001400258Re-query CCDS DB by Protein ID:NP_001387187Link to BLAST:NP_001387187.1
Original member Current member NCBI NM_001400259.1 NP_001387188.1 Accepted alive Link to Nucleotide Sequence:NM_001400259.1Link to Protein Sequence:NP_001387188.1Re-query CCDS DB by Nucleotide ID:NM_001400259Re-query CCDS DB by Protein ID:NP_001387188Link to BLAST:NP_001387188.1
Original member Current member NCBI NM_001400264.1 NP_001387193.1 Accepted alive Link to Nucleotide Sequence:NM_001400264.1Link to Protein Sequence:NP_001387193.1Re-query CCDS DB by Nucleotide ID:NM_001400264Re-query CCDS DB by Protein ID:NP_001387193Link to BLAST:NP_001387193.1
Original member Current member NCBI NM_177528.4 NP_803564.2 Accepted alive Link to Nucleotide Sequence:NM_177528.4Link to Protein Sequence:NP_803564.2Re-query CCDS DB by Nucleotide ID:NM_177528Re-query CCDS DB by Protein ID:NP_803564Link to BLAST:NP_803564.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001045.2 295 P50226 295 100% 0 0
NP_001387187.1 295 P50226 295 100% 0 0
NP_001387188.1 295 P50226 295 100% 0 0
NP_001387193.1 295 P50226 295 100% 0 0
NP_803564.2 295 P50226 295 100% 0 0

Chromosomal Locations for CCDS 10636.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 28592028 28592140 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 28592263 28592443 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 28593252 28593346 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 28593442 28593568 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 28595367 28595464 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 28595550 28595675 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 28595783 28595930 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (888 nt):
ATGGAGCTGATCCAGGACATCTCTCGCCCGCCACTGGAGTACGTGAAGGGGGTCCCGCTCATCAAGTACT
TTGCAGAGGCACTGGGGCCCCTGCAGAGCTTCCAGGCCCGGCCTGATGACCTGCTCATCAGCACCTACCC
CAAGTCCGGCACCACCTGGGTGAGCCAGATTCTGGACATGATCTACCAGGGCGGTGACCTGGAAAAGTGT
CACCGAGCTCCCATCTTCATGCGGGTGCCCTTCCTTGAGTTCAAAGTCCCAGGGATTCCCTCAGGGATGG
AGACTCTGAAAAACACACCAGCCCCACGACTCCTGAAGACACACCTGCCCCTGGCTCTGCTCCCCCAGAC
TCTGTTGGATCAGAAGGTCAAGGTGGTCTATGTTGCCCGCAACGCAAAGGATGTGGCGGTTTCCTACTAC
CACTTCTACCACATGGCCAAAGTGTACCCTCACCCTGGGACCTGGGAAAGCTTCCTGGAGAAGTTCATGG
CTGGAGAAGTGTCCTATGGGTCCTGGTACCAGCACGTGCAAGAGTGGTGGGAGCTGAGCCGCACCCACCC
TGTTCTCTACCTCTTCTATGAAGACATGAAGGAGAACCCCAAAAGGGAGATTCAAAAGATCCTGGAGTTT
GTGGGGCGCTCCCTGCCAGAGGAGACTGTGGACCTCATGGTTGAGCACACGTCGTTCAAGGAGATGAAGA
AGAACCCTATGACCAACTACACCACCGTCCGCCGGGAGTTCATGGACCACAGCATCTCCCCCTTCATGAG
GAAAGGCATGGCTGGGGACTGGAAGACCACCTTCACCGTGGCGCAGAATGAGCGCTTCGATGCGGACTAT
GCGAAGAAGATGGCAGGCTGCAGCCTCAGCTTCCGCTCTGAGCTGTGA

Translation (295 aa):
MELIQDISRPPLEYVKGVPLIKYFAEALGPLQSFQARPDDLLISTYPKSGTTWVSQILDMIYQGGDLEKC
HRAPIFMRVPFLEFKVPGIPSGMETLKNTPAPRLLKTHLPLALLPQTLLDQKVKVVYVARNAKDVAVSYY
HFYHMAKVYPHPGTWESFLEKFMAGEVSYGSWYQHVQEWWELSRTHPVLYLFYEDMKENPKREIQKILEF
VGRSLPEETVDLMVEHTSFKEMKKNPMTNYTTVRREFMDHSISPFMRKGMAGDWKTTFTVAQNERFDADY
AKKMAGCSLSFRSEL


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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