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Report for CCDS11855.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11855.1 Public Homo sapiens 18 IMPA2 24 110 108 CCDS HistoryNCBI Gene:3613Re-query CCDS DB by CCDS ID:11855.1Re-query CCDS DB by GeneID:3613See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11855.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000269159.8 ENSP00000269159.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000269159.8Link to Ensembl Protein Viewer:ENSP00000269159.3Re-query CCDS DB by Nucleotide ID:ENST00000269159Re-query CCDS DB by Protein ID:ENSP00000269159
Original member Current member NCBI NM_014214.3 NP_055029.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014214.3Link to Protein Sequence:NP_055029.1Re-query CCDS DB by Nucleotide ID:NM_014214Re-query CCDS DB by Protein ID:NP_055029Link to BLAST:NP_055029.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055029.1 288 O14732-1 288 100% 0 0

Chromosomal Locations for CCDS 11855.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 18 (NC_000018.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 11981670 11981765 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 11999054 11999187 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 12009883 12009987 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 12012170 12012215 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 12014265 12014373 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 12028043 12028151 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 12028842 12028993 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 12030343 12030458 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (867 nt):
ATGAAGCCGAGCGGCGAGGACCAGGCGGCGCTGGCGGCCGGCCCCTGGGAGGAGTGCTTCCAGGCGGCCG
TGCAGCTGGCGCTGCGGGCAGGACAGATCATCAGAAAAGCCCTTACTGAGGAAAAACGTGTCTCAACAAA
AACATCAGCTGCAGATCTTGTGACAGAAACAGATCACCTTGTGGAAGATTTAATTATTTCTGAGTTGCGA
GAGAGGTTTCCTTCACACAGGTTCATTGCAGAAGAGGCCGCGGCTTCTGGGGCCAAGTGTGTGCTCACCC
ACAGCCCGACGTGGATCATCGACCCCATCGACGGCACCTGCAATTTTGTGCACAGATTCCCGACTGTGGC
GGTTAGCATTGGATTTGCTGTTCGACAAGAGCTTGAATTCGGAGTGATTTACCACTGCACAGAGGAGCGG
CTGTACACGGGCCGGCGGGGTCGGGGCGCCTTCTGCAATGGCCAGCGGCTCCGGGTCTCCGGGGAGACAG
ATCTCTCAAAGGCCTTGGTTCTGACAGAAATTGGCCCCAAACGTGACCCTGCGACCCTGAAGCTGTTCCT
GAGTAACATGGAGCGGCTGCTGCATGCCAAGGCGCATGGGGTCCGAGTGATTGGAAGCTCCACATTGGCA
CTCTGCCACCTGGCCTCAGGGGCCGCGGATGCCTATTACCAGTTTGGCCTGCACTGCTGGGATCTGGCGG
CTGCCACAGTCATCATCAGAGAAGCAGGCGGCATCGTGATAGACACTTCGGGTGGACCCCTCGACCTCAT
GGCTTGCAGAGTGGTTGCGGCCAGCACCCGGGAGATGGCGATGCTCATAGCTCAGGCCTTACAGACGATT
AACTATGGGCGGGATGATGAGAAGTGA

Translation (288 aa):
MKPSGEDQAALAAGPWEECFQAAVQLALRAGQIIRKALTEEKRVSTKTSAADLVTETDHLVEDLIISELR
ERFPSHRFIAEEAAASGAKCVLTHSPTWIIDPIDGTCNFVHRFPTVAVSIGFAVRQELEFGVIYHCTEER
LYTGRRGRGAFCNGQRLRVSGETDLSKALVLTEIGPKRDPATLKLFLSNMERLLHAKAHGVRVIGSSTLA
LCHLASGAADAYYQFGLHCWDLAAATVIIREAGGIVIDTSGGPLDLMACRVVAASTREMAMLIAQALQTI
NYGRDDEK


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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