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Report for CCDS12043.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12043.1 Public Homo sapiens 19 PLPPR3 24 110 108 CCDS HistoryNCBI Gene:79948Re-query CCDS DB by CCDS ID:12043.1Re-query CCDS DB by GeneID:79948See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12043.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000359894.6 ENSP00000352962.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000359894.6Link to Ensembl Protein Viewer:ENSP00000352962.2Re-query CCDS DB by Nucleotide ID:ENST00000359894Re-query CCDS DB by Protein ID:ENSP00000352962
Original member Current member NCBI NM_024888.3 NP_079164.1 Accepted alive Link to Nucleotide Sequence:NM_024888.3Link to Protein Sequence:NP_079164.1Re-query CCDS DB by Nucleotide ID:NM_024888Re-query CCDS DB by Protein ID:NP_079164Link to BLAST:NP_079164.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079164.1 746 Q6T4P5-3 746 100% 0 0

Chromosomal Locations for CCDS 12043.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 812570 813895 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 814434 814749 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 814886 815081 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 815186 815327 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 815666 815851 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 821485 821559 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2241 nt):
ATGATCTCCACCAAGGAGAAGAACAAGATCCCGAAGGACAGCATGACGCTTCTGCCCTGCTTCTACTTCG
TGGAGCTGCCCATAGTGGCTTCTTCCATCGTATCCTTGTACTTCCTGGAGCTGACCGACCTCTTCAAGCC
GGCCAAGGTGGGCTTCCAGTGCTATGACCGCACTCTCTCCATGCCCTACGTGGAGACCAACGAGGAGCTC
ATCCCGCTGCTGATGCTGCTCAGCTTGGCCTTCGCGGCCCCTGCCGCCTCGATCATGGTGGCCGAGGGCA
TGTTGTACTGTCTGCAGTCCCGGCTGTGGGGCCGTGCCGGGGGGCCCGCCGGGGCGGAGGGCAGCATCAA
CGCCGGCGGCTGCAACTTCAACTCCTTCCTGCGGCGTACGGTGCGGTTTGTGGGTGTCCACGTGTTCGGC
CTGTGTGCCACAGCCCTGGTGACGGACGTGATCCAGCTGGCCACGGGTTACCACACTCCCTTCTTCCTCA
CCGTCTGCAAGCCCAACTACACTCTCCTGGGCACGTCCTGCGAGGTCAACCCCTACATCACGCAGGACAT
CTGCTCCGGCCACGACATCCACGCCATCCTGTCTGCACGGAAGACCTTCCCGTCCCAGCACGCCACGCTG
TCAGCCTTCGCCGCGGTCTATGTGTCGGTGAGTCCGGCCCCTCACTGCCCTTCCCAGGCCCTCTTGCTGA
CCCGTGGGGAGCCCTCCCTGACCCCAACCCCCATGCCCCAGATGTACTTCAACTCGGTCATCTCGGACAC
CACCAAGCTGCTGAAGCCCATCCTGGTCTTCGCCTTTGCCATCGCCGCGGGCGTATGCGGGCTCACGCAG
ATCACGCAGTACCGCAGCCACCCTGTGGACGTGTATGCCGGCTTCCTCATCGGGGCGGGCATCGCTGCCT
ACCTGGCCTGCCACGCGGTGGGCAACTTCCAGGCCCCACCTGCAGAGAAGCCCGCGGCCCCGGCCCCCGC
CAAGGACGCGCTGCGGGCCCTGACGCAGCGGGGCCACGACTCGGTTTATCAGCAGAATAAGTCGGTGAGC
ACCGACGAGCTGGGGCCCCCAGGGCGGCTGGAGGGCGCGCCCCGGCCCGTGGCCCGCGAGAAGACCTCGC
TGGGCAGCCTGAAGCGCGCCAGCGTGGACGTGGACCTGCTGGCCCCGCGCAGCCCCATGGCCAAGGAGAA
CATGGTGACCTTCAGCCACACGCTGCCCAGGGCCAGCGCGCCCTCGCTGGACGACCCCGCGCGCCGCCAC
ATGACCATCCACGTGCCGCTGGACGCCTCGCGCTCCAAGCAGCTCATCAGCGAGTGGAAGCAGAAGAGCC
TGGAGGGCCGCGGCCTGGGGCTGCCCGACGACGCCAGCCCCGGGCACCTGCGCGCGCCCGCCGAACCCAT
GGCGGAGGAGGAGGAAGAGGAGGAGGACGAAGAGGAAGAGGAGGAGGAGGAAGAGGAGGAGGACGAGGGC
CCGGCCCCGCCCTCGCTCTACCCCACCGTGCAGGCGCGGCCGGGGCTGGGGCCTCGGGTCATCCTCCCAC
CGCGCGCGGGGCCGCCGCCGCTGGTGCACATCCCGGAGGAGGGCGCGCAGACGGGGGCCGGCCTGTCCCC
CAAAAGCGGCGCCGGGGTGCGCGCCAAGTGGCTCATGATGGCCGAGAAGAGCGGGGCGGCAGTGGCCAAC
CCTCCGCGGCTGCTGCAGGTCATCGCCATGTCCAAGGCTCCGGGCGCGCCGGGCCCCAAGGCGGCCGAGA
CGGCGTCGTCGTCCAGCGCCAGCTCCGACTCCTCGCAGTACCGGTCGCCGTCGGACCGCGACTCCGCCAG
CATCGTGACCATCGACGCGCACGCGCCGCACCACCCCGTGGTGCACCTGTCGGCCGGCGGCGCGCCCTGG
GAGTGGAAGGCGGCGGGCGGCGGGGCCAAGGCGGAGGCCGACGGCGGCTACGAGCTGGGGGACCTGGCGC
GCGGCTTCCGCGGCGGGGCCAAGCCCCCGGGCGTGTCCCCCGGCTCGTCGGTCAGCGACGTGGACCAGGA
GGAGCCGCGGTTCGGGGCCGTGGCCACCGTCAACCTGGCCACGGGCGAGGGGCTGCCCCCGCTGGGCGCG
GCCGATGGGGCGCTGGGCCCGGGCAGCCGGGAGTCCACGCTGCGGCGCCACGCGGGCGGCCTGGGGCTGG
CGGAGCGCGAGGCGGAGGCGGAGGCCGAGGGCTACTTCCGCAAGATGCAGGCGCGCCGCTTCCCCGACTA
G

Translation (746 aa):
MISTKEKNKIPKDSMTLLPCFYFVELPIVASSIVSLYFLELTDLFKPAKVGFQCYDRTLSMPYVETNEEL
IPLLMLLSLAFAAPAASIMVAEGMLYCLQSRLWGRAGGPAGAEGSINAGGCNFNSFLRRTVRFVGVHVFG
LCATALVTDVIQLATGYHTPFFLTVCKPNYTLLGTSCEVNPYITQDICSGHDIHAILSARKTFPSQHATL
SAFAAVYVSVSPAPHCPSQALLLTRGEPSLTPTPMPQMYFNSVISDTTKLLKPILVFAFAIAAGVCGLTQ
ITQYRSHPVDVYAGFLIGAGIAAYLACHAVGNFQAPPAEKPAAPAPAKDALRALTQRGHDSVYQQNKSVS
TDELGPPGRLEGAPRPVAREKTSLGSLKRASVDVDLLAPRSPMAKENMVTFSHTLPRASAPSLDDPARRH
MTIHVPLDASRSKQLISEWKQKSLEGRGLGLPDDASPGHLRAPAEPMAEEEEEEEDEEEEEEEEEEEDEG
PAPPSLYPTVQARPGLGPRVILPPRAGPPPLVHIPEEGAQTGAGLSPKSGAGVRAKWLMMAEKSGAAVAN
PPRLLQVIAMSKAPGAPGPKAAETASSSSASSDSSQYRSPSDRDSASIVTIDAHAPHHPVVHLSAGGAPW
EWKAAGGGAKAEADGGYELGDLARGFRGGAKPPGVSPGSSVSDVDQEEPRFGAVATVNLATGEGLPPLGA
ADGALGPGSRESTLRRHAGGLGLAEREAEAEAEGYFRKMQARRFPD


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
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