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Report for CCDS12431.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12431.1 Public Homo sapiens 19 SLC7A10 24 110 108 CCDS HistoryNCBI Gene:56301Re-query CCDS DB by CCDS ID:12431.1Re-query CCDS DB by GeneID:56301See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12431.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000253188.8 ENSP00000253188.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000253188.8Link to Ensembl Protein Viewer:ENSP00000253188.2Re-query CCDS DB by Nucleotide ID:ENST00000253188Re-query CCDS DB by Protein ID:ENSP00000253188
Original member Current member NCBI NM_019849.3 NP_062823.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_019849.3Link to Protein Sequence:NP_062823.1Re-query CCDS DB by Nucleotide ID:NM_019849Re-query CCDS DB by Protein ID:NP_062823Link to BLAST:NP_062823.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_062823.1 523 Q9NS82 523 100% 0 0

Chromosomal Locations for CCDS 12431.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 33208891 33209021 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 33209308 33209485 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 33210467 33210616 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 33210802 33210898 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 33211225 33211328 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 33211414 33211537 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 33212292 33212445 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 33212514 33212639 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 33212851 33213002 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 33215769 33215973 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 33225553 33225703 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1572 nt):
ATGGCCGGCCACACGCAGCAGCCGAGCGGGCGCGGGAACCCCAGGCCTGCGCCCTCGCCCTCCCCAGTCC
CAGGGACCGTCCCCGGCGCCTCGGAGCGGGTGGCGCTCAAGAAGGAGATCGGGCTGCTGAGCGCCTGCAC
CATCATCATCGGGAACATCATCGGCTCGGGCATCTTCATCTCGCCCAAGGGGGTCCTGGAGCACTCAGGC
TCCGTGGGTCTGGCCCTGTTCGTCTGGGTCCTGGGTGGGGGCGTGACGGCTCTGGGCTCCCTCTGCTATG
CAGAGCTGGGAGTCGCCATCCCCAAGTCTGGCGGGGACTACGCCTACGTCACAGAGATCTTCGGGGGCCT
GGCTGGCTTTCTGCTGCTCTGGAGCGCCGTCCTCATCATGTACCCCACCAGCCTTGCTGTCATCTCCATG
ACCTTCTCCAACTACGTGCTGCAGCCCGTGTTCCCCAACTGCATCCCCCCCACCACAGCCTCCCGGGTGC
TGTCCATGGCCTGCCTGATGCTCCTGACATGGGTGAACAGCTCCAGTGTGCGCTGGGCCACGCGCATCCA
GGACATGTTCACAGGCGGGAAGCTGCTGGCCTTGTCCCTCATCATCGGCGTGGGCCTTCTCCAGATCTTC
CAAGGACACTTCGAGGAGCTGAGGCCCAGCAATGCCTTTGCTTTCTGGATGACGCCCTCCGTGGGACACC
TGGCCCTGGCCTTCCTCCAGGGCTCCTTCGCCTTCAGTGGCTGGAACTTCCTCAACTATGTCACCGAGGA
GATGGTTGACGCCCGAAAGAACCTACCTCGCGCCATCTTCATCTCCATCCCACTGGTGACCTTCGTGTAC
ACGTTCACCAACATTGCCTACTTCACGGCCATGTCCCCCCAGGAGCTGCTCTCCTCCAATGCGGTGGCTG
TGACCTTCGGGGAGAAGCTGCTGGGCTACTTTTCTTGGGTCATGCCTGTCTCCGTGGCTCTGTCAACCTT
CGGAGGGATCAATGGTTACCTGTTCACCTACTCCAGGCTGTGCTTCTCTGGAGCCCGCGAGGGGCACCTG
CCCAGCCTGCTGGCCATGATCCACGTCAGACACTGCACCCCCATCCCCGCCCTCCTCGTCTGTTGCGGGG
CCACAGCCGTCATCATGCTCGTGGGCGACACGTACACGCTCATCAACTATGTGTCCTTCATCAACTACCT
CTGCTACGGCGTCACCATCCTGGGCCTGCTGCTGCTGCGCTGGAGGCGGCCTGCACTCCACAGGCCCATC
AAGGTGAACCTTCTCATCCCCGTGGCGTACTTGGTCTTCTGGGCCTTCCTGCTGGTCTTCAGCTTCATCT
CAGAGCCTATGGTCTGTGGGGTCGGCGTCATCATCATCCTTACGGGGGTGCCCATTTTCTTTCTGGGAGT
GTTCTGGAGAAGCAAACCAAAGTGTGTGCACAGACTCACAGAGTCCATGACACACTGGGGCCAGGAGCTG
TGTTTCGTGGTCTACCCCCAGGACGCCCCCGAAGAGGAGGAGAATGGCCCCTGCCCACCCTCCCTGCTGC
CTGCCACAGACAAGCCCTCGAAGCCACAATGA

Translation (523 aa):
MAGHTQQPSGRGNPRPAPSPSPVPGTVPGASERVALKKEIGLLSACTIIIGNIIGSGIFISPKGVLEHSG
SVGLALFVWVLGGGVTALGSLCYAELGVAIPKSGGDYAYVTEIFGGLAGFLLLWSAVLIMYPTSLAVISM
TFSNYVLQPVFPNCIPPTTASRVLSMACLMLLTWVNSSSVRWATRIQDMFTGGKLLALSLIIGVGLLQIF
QGHFEELRPSNAFAFWMTPSVGHLALAFLQGSFAFSGWNFLNYVTEEMVDARKNLPRAIFISIPLVTFVY
TFTNIAYFTAMSPQELLSSNAVAVTFGEKLLGYFSWVMPVSVALSTFGGINGYLFTYSRLCFSGAREGHL
PSLLAMIHVRHCTPIPALLVCCGATAVIMLVGDTYTLINYVSFINYLCYGVTILGLLLLRWRRPALHRPI
KVNLLIPVAYLVFWAFLLVFSFISEPMVCGVGVIIILTGVPIFFLGVFWRSKPKCVHRLTESMTHWGQEL
CFVVYPQDAPEEEENGPCPPSLLPATDKPSKPQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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