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Report for CCDS12465.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12465.1 Public Homo sapiens 19 GAPDHS 24 110 108 CCDS HistoryNCBI Gene:26330Re-query CCDS DB by CCDS ID:12465.1Re-query CCDS DB by GeneID:26330See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12465.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000222286.9 ENSP00000222286.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000222286.9Link to Ensembl Protein Viewer:ENSP00000222286.3Re-query CCDS DB by Nucleotide ID:ENST00000222286Re-query CCDS DB by Protein ID:ENSP00000222286
Original member Current member NCBI NM_014364.5 NP_055179.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014364.5Link to Protein Sequence:NP_055179.1Re-query CCDS DB by Nucleotide ID:NM_014364Re-query CCDS DB by Protein ID:NP_055179Link to BLAST:NP_055179.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055179.1 408 O14556 408 100% 0 0

Chromosomal Locations for CCDS 12465.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 35533528 35533594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35536813 35536990 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35538307 35538403 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35538577 35538683 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35542319 35542409 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35542490 35542608 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35542945 35543026 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35543340 35543491 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35543665 35543827 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35544909 35545006 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35545098 35545170 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1227 nt):
ATGTCGAAGCGCGACATCGTCCTCACCAATGTCACCGTTGTCCAGTTGCTGCGACAGCCGTGCCCGGTGA
CCAGAGCACCGCCCCCACCTGAGCCTAAGGCTGAAGTAGAGCCCCAGCCACAACCAGAGCCCACACCAGT
CAGGGAGGAAATAAAGCCACCACCGCCACCACTGCCTCCTCACCCCGCTACTCCTCCTCCTAAGATGGTG
TCTGTGGCCCGGGAGCTGACTGTGGGCATCAATGGATTTGGACGCATCGGTCGCCTGGTCCTGCGCGCCT
GCATGGAGAAGGGTGTTAAGGTGGTGGCTGTGAATGATCCATTCATTGACCCGGAATACATGGTGTACAT
GTTTAAGTATGACTCCACCCACGGCCGATACAAGGGAAGTGTGGAATTCAGGAATGGACAACTGGTCGTG
GACAACCATGAGATCTCTGTCTACCAGTGCAAAGAGCCCAAACAGATCCCCTGGAGGGCTGTCGGGAGCC
CCTACGTGGTGGAGTCCACAGGCGTGTACCTCTCCATACAGGCAGCTTCGGACCACATCTCTGCAGGTGC
TCAACGTGTGGTCATCTCCGCGCCCTCACCGGATGCACCAATGTTCGTCATGGGTGTCAATGAAAATGAC
TATAACCCTGGCTCCATGAACATTGTGAGCAACGCGTCCTGCACCACCAACTGTTTGGCTCCCCTCGCCA
AAGTCATCCACGAGCGATTTGGGATCGTGGAAGGGTTGATGACCACAGTCCATTCCTACACGGCCACCCA
GAAGACAGTGGACGGGCCATCAAGGAAGGCCTGGCGAGATGGGCGGGGTGCCCACCAGAACATCATCCCA
GCCTCCACTGGGGCTGCGAAAGCTGTGACCAAAGTCATCCCAGAGCTCAAAGGGAAGCTGACAGGGATGG
CGTTCCGGGTACCAACCCCGGATGTGTCTGTCGTGGACCTGACCTGCCGCCTCGCCCAGCCTGCCCCCTA
CTCAGCCATCAAGGAGGCTGTAAAAGCAGCAGCCAAGGGGCCCATGGCTGGCATCCTTGCCTACACCGAG
GATGAGGTCGTCTCTACGGACTTCCTCGGTGATACCCACTCGTCCATCTTCGATGCTAAGGCCGGCATTG
CGCTCAATGACAATTTCGTGAAGCTCATTTCATGGTACGACAACGAATATGGCTACAGTCACCGGGTGGT
CGACCTCCTCCGCTACATGTTCAGCCGAGACAAGTGA

Translation (408 aa):
MSKRDIVLTNVTVVQLLRQPCPVTRAPPPPEPKAEVEPQPQPEPTPVREEIKPPPPPLPPHPATPPPKMV
SVARELTVGINGFGRIGRLVLRACMEKGVKVVAVNDPFIDPEYMVYMFKYDSTHGRYKGSVEFRNGQLVV
DNHEISVYQCKEPKQIPWRAVGSPYVVESTGVYLSIQAASDHISAGAQRVVISAPSPDAPMFVMGVNEND
YNPGSMNIVSNASCTTNCLAPLAKVIHERFGIVEGLMTTVHSYTATQKTVDGPSRKAWRDGRGAHQNIIP
ASTGAAKAVTKVIPELKGKLTGMAFRVPTPDVSVVDLTCRLAQPAPYSAIKEAVKAAAKGPMAGILAYTE
DEVVSTDFLGDTHSSIFDAKAGIALNDNFVKLISWYDNEYGYSHRVVDLLRYMFSRDK


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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