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Report for CCDS13899.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13899.1 Public Homo sapiens 22 PISD 24 110 108 CCDS HistoryNCBI Gene:23761Re-query CCDS DB by CCDS ID:13899.1Re-query CCDS DB by GeneID:23761See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13899.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000266095.9 ENSP00000266095.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000266095.9Link to Ensembl Protein Viewer:ENSP00000266095.5Re-query CCDS DB by Nucleotide ID:ENST00000266095Re-query CCDS DB by Protein ID:ENSP00000266095
Original member Current member EBI ENST00000382151.6 ENSP00000371586.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000382151.6Link to Ensembl Protein Viewer:ENSP00000371586.2Re-query CCDS DB by Nucleotide ID:ENST00000382151Re-query CCDS DB by Protein ID:ENSP00000371586
Original member Current member NCBI NM_001326415.2 NP_001313344.1 Accepted alive Link to Nucleotide Sequence:NM_001326415.2Link to Protein Sequence:NP_001313344.1Re-query CCDS DB by Nucleotide ID:NM_001326415Re-query CCDS DB by Protein ID:NP_001313344Link to BLAST:NP_001313344.1
Original member Current member NCBI NM_001326416.2 NP_001313345.1 Accepted alive Link to Nucleotide Sequence:NM_001326416.2Link to Protein Sequence:NP_001313345.1Re-query CCDS DB by Nucleotide ID:NM_001326416Re-query CCDS DB by Protein ID:NP_001313345Link to BLAST:NP_001313345.1
Original member Current member NCBI NM_001326417.2 NP_001313346.1 Accepted alive Link to Nucleotide Sequence:NM_001326417.2Link to Protein Sequence:NP_001313346.1Re-query CCDS DB by Nucleotide ID:NM_001326417Re-query CCDS DB by Protein ID:NP_001313346Link to BLAST:NP_001313346.1
Original member Current member NCBI NM_014338.4 NP_055153.1 Accepted alive Link to Nucleotide Sequence:NM_014338.4Link to Protein Sequence:NP_055153.1Re-query CCDS DB by Nucleotide ID:NM_014338Re-query CCDS DB by Protein ID:NP_055153Link to BLAST:NP_055153.1
Original member Current member NCBI NM_178022.2 NP_821141.1 Accepted alive Link to Nucleotide Sequence:NM_178022.2Link to Protein Sequence:NP_821141.1Re-query CCDS DB by Nucleotide ID:NM_178022Re-query CCDS DB by Protein ID:NP_821141Link to BLAST:NP_821141.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001313344.1 375 Q9UG56-2 375 100% 0 0
NP_001313345.1 375 Q9UG56-2 375 100% 0 0
NP_001313346.1 375 Q9UG56-2 375 100% 0 0
NP_055153.1 375 Q9UG56-2 375 100% 0 0
NP_821141.1 375 Q9UG56-2 375 100% 0 0

Chromosomal Locations for CCDS 13899.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 31619612 31619836 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 31620553 31620713 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 31620996 31621142 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 31621334 31621472 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 31621649 31621885 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 31623684 31623849 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 31625763 31625815 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1128 nt):
ATGATGTGTCAGTCAGAGGCGCGGCAAGGACCAGAGCTCCGCGCGGCGAAATGGTTGCACTTCCCCCAGC
TGGCCCTGAGGCGGAGGCTGGGGCAGCTGAGCTGCATGTCCAGACCCGCTCTGAAACTGCGCTCCTGGCC
CTTGACCGTCCTCTACTACCTCCTGCCCTTCGGCGCCCTCAGACCGCTCAGCCGGGTGGGATGGAGGCCC
GTAAGCAGGGTGGCTTTGTACAAGTCAGTGCCAACGCGCTTGCTGTCACGGGCCTGGGGTCGCCTCAATC
AGGTGGAGCTGCCACACTGGCTGCGCAGGCCCGTCTACAGCCTGTACATCTGGACGTTTGGGGTGAACAT
GAAAGAGGCCGCTGTGGAGGACCTGCATCACTACCGCAACCTCAGCGAGTTCTTCCGGCGCAAGCTGAAG
CCGCAGGCCCGGCCTGTCTGTGGCCTGCACAGCGTGATTAGCCCATCGGATGGAAGGATCCTCAACTTTG
GGCAGGTGAAGAACTGTGAGGTGGAGCAGGTAAAGGGGGTCACCTACTCCCTGGAGTCGTTCCTGGGCCC
GCGTATGTGCACAGAGGACCTGCCCTTCCCACCAGCCGCGTCGTGTGACTCCTTCAAGAACCAGCTGGTC
ACCCGGGAAGGGAATGAGCTCTATCACTGTGTCATCTACCTGGCCCCTGGGGACTACCACTGCTTCCACT
CCCCCACCGACTGGACTGTGTCCCACCGGCGCCACTTCCCAGGCTCCCTGATGTCAGTGAACCCTGGCAT
GGCTCGCTGGATCAAAGAGCTCTTCTGCCATAACGAGCGGGTGGTCCTGACGGGGGACTGGAAACATGGC
TTCTTCTCACTGACAGCTGTGGGGGCCACCAACGTGGGCTCCATTCGCATCTACTTTGACCGGGACCTGC
ACACAAACAGCCCAAGGCACAGCAAGGGCTCCTACAATGACTTCAGCTTCGTGACGCACACCAATAGAGA
GGGCGTCCCCATGCGTAAGGGCGAGCACCTGGGCGAGTTCAACCTGGGCTCCACCATCGTGCTCATCTTC
GAGGCCCCCAAGGACTTCAATTTCCAGCTGAAAACAGGACAGAAAATCCGCTTTGGGGAAGCCCTGGGCT
CGCTCTAG

Translation (375 aa):
MMCQSEARQGPELRAAKWLHFPQLALRRRLGQLSCMSRPALKLRSWPLTVLYYLLPFGALRPLSRVGWRP
VSRVALYKSVPTRLLSRAWGRLNQVELPHWLRRPVYSLYIWTFGVNMKEAAVEDLHHYRNLSEFFRRKLK
PQARPVCGLHSVISPSDGRILNFGQVKNCEVEQVKGVTYSLESFLGPRMCTEDLPFPPAASCDSFKNQLV
TREGNELYHCVIYLAPGDYHCFHSPTDWTVSHRRHFPGSLMSVNPGMARWIKELFCHNERVVLTGDWKHG
FFSLTAVGATNVGSIRIYFDRDLHTNSPRHSKGSYNDFSFVTHTNREGVPMRKGEHLGEFNLGSTIVLIF
EAPKDFNFQLKTGQKIRFGEALGSL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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