NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS14081.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14081.1 Public Homo sapiens 22 ALG12 24 110 108 CCDS HistoryNCBI Gene:79087Re-query CCDS DB by CCDS ID:14081.1Re-query CCDS DB by GeneID:79087See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14081.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000330817.11 ENSP00000333813.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000330817.11Link to Ensembl Protein Viewer:ENSP00000333813.5Re-query CCDS DB by Nucleotide ID:ENST00000330817Re-query CCDS DB by Protein ID:ENSP00000333813
Original member Current member NCBI NM_024105.4 NP_077010.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024105.4Link to Protein Sequence:NP_077010.1Re-query CCDS DB by Nucleotide ID:NM_024105Re-query CCDS DB by Protein ID:NP_077010Link to BLAST:NP_077010.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_077010.1 488 Q9BV10 488 100% 0 0

Chromosomal Locations for CCDS 14081.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 49903838 49904066 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 49904179 49904254 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 49904337 49904506 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 49907721 49907944 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 49909244 49909347 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 49909894 49910088 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 49910434 49910607 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 49913385 49913517 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 49913604 49913765 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1467 nt):
ATGGCTGGAAAGGGGTCATCAGGCAGGCGGCCCCTGCTGCTGGGGCTGCTGGTGGCCGTAGCCACTGTCC
ACCTGGTCATCTGTCCCTACACCAAAGTGGAGGAGAGCTTCAACCTGCAGGCCACACATGACCTGCTCTA
CCACTGGCAAGACCTGGAGCAGTACGACCATCTTGAGTTCCCCGGAGTCGTCCCCAGGACGTTCCTCGGG
CCAGTGGTGATCGCAGTGTTCTCCAGCCCCGCGGTTTACGTGCTTTCGCTGTTAGAAATGTCCAAGTTTT
ACTCTCAGCTAATAGTTAGAGGAGTGCTTGGACTCGGCGTGATTTTTGGACTCTGGACGTTACAAAAGGA
AGTGAGACGGCACTTCGGGGCCATGGTGGCCACCATGTTCTGCTGGGTGACGGCCATGCAGTTCCACCTG
ATGTTCTACTGCACGCGGACACTGCCCAATGTGCTGGCCCTGCCTGTAGTCCTGCTGGCCCTCGCGGCCT
GGCTGCGGCACGAGTGGGCCCGCTTCATCTGGCTGTCAGCCTTCGCCATCATCGTGTTCAGGGTGGAGCT
GTGCCTGTTCCTGGGCCTCCTGCTGCTGCTGGCCTTGGGCAACCGAAAGGTTTCTGTAGTCAGAGCCCTT
CGCCACGCCGTCCCGGCAGGGATCCTCTGTTTAGGACTGACGGTTGCTGTGGACTCTTATTTTTGGCGGC
AGCTCACTTGGCCGGAAGGAAAGGTGCTTTGGTACAACACTGTCCTGAACAAAAGCTCCAACTGGGGGAC
CTCCCCGCTGCTGTGGTACTTCTACTCAGCCCTGCCCCGCGGCCTGGGCTGCAGCCTGCTCTTCATCCCC
CTGGGCTTGGTAGACAGAAGGACGCACGCGCCGACGGTGCTGGCACTGGGCTTCATGGCACTCTACTCCC
TCCTGCCACACAAGGAGCTACGCTTCATCATCTATGCCTTCCCCATGCTCAACATCACGGCTGCCAGAGG
CTGCTCCTACCTGCTGAATAACTATAAAAAGTCTTGGCTGTACAAAGCGGGGTCTCTGCTTGTGATCGGA
CACCTCGTGGTGAATGCCGCCTACTCAGCCACGGCCCTGTATGTGTCCCATTTCAACTACCCAGGTGGCG
TCGCAATGCAGAGGCTGCACCAGCTGGTGCCCCCCCAGACAGACGTCCTTCTGCACATTGACGTGGCAGC
CGCCCAGACAGGTGTGTCTCGGTTTCTCCAAGTCAACAGCGCCTGGAGGTACGACAAGAGGGAGGATGTG
CAGCCGGGGACAGGCATGCTGGCATACACACACATCCTCATGGAGGCGGCCCCTGGGCTCCTGGCCCTCT
ACAGGGACACACACCGGGTCCTGGCCAGCGTCGTGGGGACCACAGGTGTGAGTCTGAACCTGACCCAACT
GCCCCCCTTCAACGTCCACCTGCAGACAAAGCTGGTGCTTCTGGAGAGGCTCCCCCGGCCGTCCTGA

Translation (488 aa):
MAGKGSSGRRPLLLGLLVAVATVHLVICPYTKVEESFNLQATHDLLYHWQDLEQYDHLEFPGVVPRTFLG
PVVIAVFSSPAVYVLSLLEMSKFYSQLIVRGVLGLGVIFGLWTLQKEVRRHFGAMVATMFCWVTAMQFHL
MFYCTRTLPNVLALPVVLLALAAWLRHEWARFIWLSAFAIIVFRVELCLFLGLLLLLALGNRKVSVVRAL
RHAVPAGILCLGLTVAVDSYFWRQLTWPEGKVLWYNTVLNKSSNWGTSPLLWYFYSALPRGLGCSLLFIP
LGLVDRRTHAPTVLALGFMALYSLLPHKELRFIIYAFPMLNITAARGCSYLLNNYKKSWLYKAGSLLVIG
HLVVNAAYSATALYVSHFNYPGGVAMQRLHQLVPPQTDVLLHIDVAAAQTGVSRFLQVNSAWRYDKREDV
QPGTGMLAYTHILMEAAPGLLALYRDTHRVLASVVGTTGVSLNLTQLPPFNVHLQTKLVLLERLPRPS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH