NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS14268.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14268.1 Public Homo sapiens X CHST7 24 110 108 CCDS HistoryNCBI Gene:56548Re-query CCDS DB by CCDS ID:14268.1Re-query CCDS DB by GeneID:56548See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14268.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000276055.4 ENSP00000276055.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000276055.4Link to Ensembl Protein Viewer:ENSP00000276055.3Re-query CCDS DB by Nucleotide ID:ENST00000276055Re-query CCDS DB by Protein ID:ENSP00000276055
Original member Current member NCBI NM_019886.4 NP_063939.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_019886.4Link to Protein Sequence:NP_063939.2Re-query CCDS DB by Nucleotide ID:NM_019886Re-query CCDS DB by Protein ID:NP_063939Link to BLAST:NP_063939.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_063939.2 486 Q9NS84 486 100% 0 0

Chromosomal Locations for CCDS 14268.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 46573932 46575392 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1461 nt):
ATGAAGGGCCGGCGGCGGCGACGCCGAGAGTACTGCAAGTTCGCGCTGCTGTTGGTGCTGTACACGCTGG
TGCTGTTGCTCGTCCCCTCCGTATTGGACGGCGGCCGCGACGGGGACAAGGGCGCCGAGCACTGCCCCGG
CCTGCAGCGCAGCCTGGGAGTGTGGAGCCTGGAGGCGGCGGCGGCCGGCGAACGCGAGCAGGGAGCGGAG
GCGCGGGCCGCCGAGGAAGGGGGCGCGAACCAGTCTCCTCGGTTCCCAAGCAACCTCAGCGGCGCTGTCG
GGGAGGCAGTGTCTCGCGAGAAGCAGCACATCTACGTGCATGCCACCTGGCGCACCGGCTCGTCCTTCCT
GGGCGAACTCTTTAACCAGCACCCGGACGTTTTCTACTTGTATGAGCCCATGTGGCATCTATGGCAGGCG
CTGTATCCGGGCGACGCCGAGAGCTTGCAGGGCGCGCTGCGCGACATGCTGCGTTCGCTCTTCCGCTGCG
ACTTCTCCGTGCTGCGGCTGTACGCGCCGCCGGGGGACCCCGCTGCGCGCGCCCCGGACACGGCCAATCT
TACCACGGCCGCCCTCTTCCGCTGGCGGACTAACAAGGTCATCTGCTCGCCGCCACTGTGTCCTGGCGCA
CCCCGTGCCCGGGCCGAGGTGGGCCTCGTCGAGGACACCGCCTGCGAGCGCAGCTGCCCACCCGTGGCGA
TACGCGCCCTGGAGGCCGAGTGCCGAAAGTACCCGGTGGTGGTCATCAAGGACGTGCGCCTGCTCGATCT
GGGCGTGCTGGTGCCCCTGTTGCGTGATCCAGGCCTCAACCTGAAGGTGGTGCAGCTTTTCCGCGACCCG
AGGGCGGTGCACAACTCGCGCCTCAAGTCTAGGCAGGGACTGCTGCGCGAGAGCATCCAGGTGCTGCGCA
CCCGCCAGAGGGGCGACCGCTTCCACCGTGTGCTGCTGGCGCACGGCGTGGGTGCTCGCCCCGGGGGCCA
GTCTCGCGCGCTGCCCGCCGCGCCGCGCGCCGATTTCTTCCTGACCGGTGCGCTCGAGGTGATCTGCGAA
GCCTGGCTGCGCGATCTGCTTTTCGCGCGCGGCGCGCCCGCCTGGCTGCGGCGCCGCTACCTGAGGCTGC
GCTATGAGGACCTGGTGCGGCAGCCACGCGCCCAGCTGCGCCGCCTGCTGCGCTTCTCCGGGCTACGCGC
GCTCGCAGCGCTCGATGCCTTCGCGCTCAACATGACTCGCGGCGCGGCCTACGGCGCCGACCGGCCCTTC
CACCTGTCAGCGCGCGACGCCCGGGAGGCGGTGCACGCCTGGCGCGAGCGCCTGAGCCGAGAGCAGGTGC
GCCAGGTGGAGGCCGCCTGCGCTCCAGCCATGCGTCTGCTCGCCTACCCTCGCAGCGGAGAGGAGGGCGA
CGCGGAGCAGCCCAGGGAAGGGGAGACGCCGCTGGAGATGGATGCCGACGGCGCCACGTAG

Translation (486 aa):
MKGRRRRRREYCKFALLLVLYTLVLLLVPSVLDGGRDGDKGAEHCPGLQRSLGVWSLEAAAAGEREQGAE
ARAAEEGGANQSPRFPSNLSGAVGEAVSREKQHIYVHATWRTGSSFLGELFNQHPDVFYLYEPMWHLWQA
LYPGDAESLQGALRDMLRSLFRCDFSVLRLYAPPGDPAARAPDTANLTTAALFRWRTNKVICSPPLCPGA
PRARAEVGLVEDTACERSCPPVAIRALEAECRKYPVVVIKDVRLLDLGVLVPLLRDPGLNLKVVQLFRDP
RAVHNSRLKSRQGLLRESIQVLRTRQRGDRFHRVLLAHGVGARPGGQSRALPAAPRADFFLTGALEVICE
AWLRDLLFARGAPAWLRRRYLRLRYEDLVRQPRAQLRRLLRFSGLRALAALDAFALNMTRGAAYGADRPF
HLSARDAREAVHAWRERLSREQVRQVEAACAPAMRLLAYPRSGEEGDAEQPREGETPLEMDADGAT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH