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Report for CCDS14269.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14269.1 Public Homo sapiens X SLC9A7 24 110 108 CCDS HistoryNCBI Gene:84679Re-query CCDS DB by CCDS ID:14269.1Re-query CCDS DB by GeneID:84679See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14269.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000328306.4 ENSP00000330320.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000328306.4Link to Ensembl Protein Viewer:ENSP00000330320.4Re-query CCDS DB by Nucleotide ID:ENST00000328306Re-query CCDS DB by Protein ID:ENSP00000330320
Original member Current member NCBI NM_032591.3 NP_115980.1 Accepted alive Link to Nucleotide Sequence:NM_032591.3Link to Protein Sequence:NP_115980.1Re-query CCDS DB by Nucleotide ID:NM_032591Re-query CCDS DB by Protein ID:NP_115980Link to BLAST:NP_115980.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_115980.1 725 Q96T83 725 100% 0 0

Chromosomal Locations for CCDS 14269.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 46606952 46607203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 46613289 46613394 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 46620977 46621059 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 46631586 46631649 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 46635589 46635648 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 46643236 46643389 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 46648686 46648797 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 46651110 46651223 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 46651316 46651404 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 46653609 46653723 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 46662028 46662157 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 46662538 46662643 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 46669607 46669719 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 46672551 46672627 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 46679678 46679755 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 46682336 46682535 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 46758705 46759029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2178 nt):
ATGGAGCCTGGTGACGCGGCGCGCCCTGGCTCGGGTCGGGCTACCGGGGCGCCGCCGCCGCGGCTGCTGC
TGCTGCCGCTGCTGCTGGGTTGGGGGCTGCGAGTCGCGGCCGCGGCCTCGGCCTCCTCCTCTGGGGCGGC
GGCGGAGGACAGCAGCGCCATGGAGGAGCTCGCTACTGAGAAGGAGGCGGAGGAGAGCCACCGGCAAGAC
AGCGTGAGCCTGCTCACCTTCATCCTGCTGCTCACGCTCACCATCCTCACCATCTGGCTCTTCAAGCACC
GCCGGGTGCGCTTTCTGCACGAGACCGGGCTGGCCATGATCTATGGGCTCATCGTTGGGGTGATCCTGAG
GTATGGTACCCCTGCTACCAGTGGCCGTGACAAATCACTCAGCTGCACTCAGGAAGACAGGGCCTTCAGT
ACCTTATTAGTGAATGTCAGCGGAAAGTTCTTCGAATACACTCTGAAAGGAGAAATCAGTCCTGGCAAGA
TCAACAGCGTAGAGCAGAATGATATGCTACGGAAGGTAACATTCGATCCAGAAGTATTTTTCAACATTCT
TCTGCCTCCAATTATTTTTCATGCTGGATACAGCTTAAAGAAGAGACACTTTTTCAGAAATCTTGGATCT
ATACTGGCCTATGCCTTCTTGGGGACTGCTGTTTCATGCTTCATTATTGGAAATCTCATGTATGGTGTGG
TGAAGCTCATGAAGATTATGGGACAGCTCTCAGATAAATTTTACTACACAGATTGTCTCTTTTTTGGAGC
AATCATCTCTGCCACTGACCCAGTGACTGTGCTGGCGATATTTAATGAATTGCATGCAGACGTGGATCTT
TACGCACTTCTTTTTGGAGAGAGCGTCCTAAATGATGCTGTTGCCATTGTACTGTCCTCGTCTATTGTTG
CCTACCAGCCAGCGGGACTGAACACTCACGCCTTTGATGCTGCTGCCTTTTTTAAGTCAGTTGGCATTTT
TCTAGGTATATTTAGTGGCTCTTTTACCATGGGAGCTGTGACTGGTGTTAATGCCAACGTGACTAAGTTT
ACCAAACTGCACTGCTTCCCCCTGCTGGAGACGGCGCTGTTCTTCCTCATGTCCTGGAGCACGTTTCTCT
TGGCAGAAGCCTGCGGATTTACAGGTGTTGTAGCTGTCCTTTTCTGTGGAATCACACAAGCTCATTACAC
CTACAACAATCTGTCGGTGGAATCAAGAAGTCGAACCAAGCAGCTCTTTGAGGTGTTACATTTCCTGGCA
GAGAACTTCATCTTCTCCTACATGGGCCTGGCACTGTTTACCTTCCAGAAGCACGTTTTCAGCCCCATTT
TCATCATCGGAGCTTTTGTTGCCATCTTCCTGGGCAGAGCCGCGCACATCTACCCGCTCTCCTTCTTCCT
CAACTTGGGCAGAAGGCATAAGATTGGCTGGAATTTTCAACACATGATGATGTTTTCAGGCCTCAGGGGA
GCAATGGCATTTGCGTTGGCCATCCGTGACACGGCATCCTATGCTCGCCAGATGATGTTCACGACCACCC
TTCTCATTGTGTTCTTCACTGTCTGGATCATTGGAGGAGGCACGACACCCATGTTGTCATGGCTTAACAT
CAGAGTTGGCGTCGAGGAGCCCTCCGAAGAGGACCAGAATGAACACCACTGGCAGTACTTCAGAGTTGGT
GTTGACCCCGATCAAGACCCACCACCCAACAACGACAGCTTTCAAGTCTTACAAGGGGACGGCCCAGATT
CTGCCAGAGGAAACCGGACAAAACAGGAGAGCGCATGGATATTCAGGCTGTGGTACAGCTTTGATCACAA
TTACCTGAAGCCCATCCTCACACACAGTGGTCCCCCACTAACCACCACGCTCCCCGCCTGGTGTGGCTTA
CTAGCTCGATGTCTGACCAGTCCCCAGGTGTACGATAACCAAGAGCCACTGAGAGAGGAAGACTCTGATT
TCATCCTGACCGAAGGCGACCTGACATTGACCTACGGGGACAGCACAGTGACTGCAAATGGCTCCTCAAG
TTCGCACACCGCCTCCACGAGTCTGGAGGGCAGCCGGAGAACGAAGAGCAGCTCGGAGGAAGTGCTGGAG
CGAGACCTGGGAATGGGAGACCAGAAGGTTTCGAGCCGGGGCACCCGCCTAGTGTTTCCCCTGGAAGATA
ATGCTTGA

Translation (725 aa):
MEPGDAARPGSGRATGAPPPRLLLLPLLLGWGLRVAAAASASSSGAAAEDSSAMEELATEKEAEESHRQD
SVSLLTFILLLTLTILTIWLFKHRRVRFLHETGLAMIYGLIVGVILRYGTPATSGRDKSLSCTQEDRAFS
TLLVNVSGKFFEYTLKGEISPGKINSVEQNDMLRKVTFDPEVFFNILLPPIIFHAGYSLKKRHFFRNLGS
ILAYAFLGTAVSCFIIGNLMYGVVKLMKIMGQLSDKFYYTDCLFFGAIISATDPVTVLAIFNELHADVDL
YALLFGESVLNDAVAIVLSSSIVAYQPAGLNTHAFDAAAFFKSVGIFLGIFSGSFTMGAVTGVNANVTKF
TKLHCFPLLETALFFLMSWSTFLLAEACGFTGVVAVLFCGITQAHYTYNNLSVESRSRTKQLFEVLHFLA
ENFIFSYMGLALFTFQKHVFSPIFIIGAFVAIFLGRAAHIYPLSFFLNLGRRHKIGWNFQHMMMFSGLRG
AMAFALAIRDTASYARQMMFTTTLLIVFFTVWIIGGGTTPMLSWLNIRVGVEEPSEEDQNEHHWQYFRVG
VDPDQDPPPNNDSFQVLQGDGPDSARGNRTKQESAWIFRLWYSFDHNYLKPILTHSGPPLTTTLPAWCGL
LARCLTSPQVYDNQEPLREEDSDFILTEGDLTLTYGDSTVTANGSSSSHTASTSLEGSRRTKSSSEEVLE
RDLGMGDQKVSSRGTRLVFPLEDNA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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