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Report for CCDS1431.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1431.1 Public Homo sapiens 1 CYB5R1 24 110 108 CCDS HistoryNCBI Gene:51706Re-query CCDS DB by CCDS ID:1431.1Re-query CCDS DB by GeneID:51706See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1431.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000367249.9 ENSP00000356218.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000367249.9Link to Ensembl Protein Viewer:ENSP00000356218.4Re-query CCDS DB by Nucleotide ID:ENST00000367249Re-query CCDS DB by Protein ID:ENSP00000356218
Original member Current member NCBI NM_016243.3 NP_057327.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_016243.3Link to Protein Sequence:NP_057327.2Re-query CCDS DB by Nucleotide ID:NM_016243Re-query CCDS DB by Protein ID:NP_057327Link to BLAST:NP_057327.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_057327.2 305 Q9UHQ9 305 100% 0 0

Chromosomal Locations for CCDS 1431.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 202962527 202962699 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 202963066 202963165 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 202963642 202963727 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 202964612 202964695 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 202965371 202965500 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 202965887 202965993 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 202966528 202966600 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 202966749 202966898 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 202967191 202967205 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (918 nt):
ATGGGGATCCAGACGAGCCCCGTCCTGCTGGCCTCCCTGGGGGTGGGGCTGGTCACTCTGCTCGGCCTGG
CTGTGGGCTCCTACTTGGTTCGGAGGTCCCGCCGGCCTCAGGTCACTCTCCTGGACCCCAATGAAAAGTA
CCTGCTACGACTGCTAGACAAGACGACTGTGAGCCACAACACCAAGAGGTTCCGCTTTGCCCTGCCCACC
GCCCACCACACTCTGGGGCTGCCTGTGGGCAAACATATCTACCTCTCCACCCGAATTGATGGCAGCCTGG
TCATCAGGCCATACACTCCTGTCACCAGTGATGAGGATCAAGGCTATGTGGATCTTGTCATCAAGGTCTA
CCTGAAGGGTGTGCACCCCAAATTTCCTGAGGGAGGGAAGATGTCTCAGTACCTGGATAGCCTGAAGGTT
GGGGATGTGGTGGAGTTTCGGGGGCCAAGCGGGTTGCTCACTTACACTGGAAAAGGGCATTTTAACATTC
AGCCCAACAAGAAATCTCCACCAGAACCCCGAGTGGCGAAGAAACTGGGAATGATTGCCGGCGGGACAGG
AATCACCCCAATGCTACAGCTGATCCGGGCCATCCTGAAAGTCCCTGAAGATCCAACCCAGTGCTTTCTG
CTTTTTGCCAACCAGACAGAAAAGGATATCATCTTGCGGGAGGACTTAGAGGAACTGCAGGCCCGCTATC
CCAATCGCTTTAAGCTCTGGTTCACTCTGGATCATCCCCCAAAAGATTGGGCCTACAGCAAGGGCTTTGT
GACTGCCGACATGATCCGGGAACACCTGCCCGCTCCAGGGGATGATGTGCTGGTACTGCTTTGTGGGCCA
CCCCCAATGGTGCAGCTGGCCTGCCATCCCAACTTGGACAAACTGGGCTACTCACAAAAGATGCGATTCA
CCTACTGA

Translation (305 aa):
MGIQTSPVLLASLGVGLVTLLGLAVGSYLVRRSRRPQVTLLDPNEKYLLRLLDKTTVSHNTKRFRFALPT
AHHTLGLPVGKHIYLSTRIDGSLVIRPYTPVTSDEDQGYVDLVIKVYLKGVHPKFPEGGKMSQYLDSLKV
GDVVEFRGPSGLLTYTGKGHFNIQPNKKSPPEPRVAKKLGMIAGGTGITPMLQLIRAILKVPEDPTQCFL
LFANQTEKDIILREDLEELQARYPNRFKLWFTLDHPPKDWAYSKGFVTADMIREHLPAPGDDVLVLLCGP
PPMVQLACHPNLDKLGYSQKMRFTY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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