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Report for CCDS14545.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14545.1 Public Homo sapiens X GUCY2F 24 110 108 CCDS HistoryNCBI Gene:2986Re-query CCDS DB by CCDS ID:14545.1Re-query CCDS DB by GeneID:2986See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14545.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000218006.3 ENSP00000218006.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000218006.3Link to Ensembl Protein Viewer:ENSP00000218006.2Re-query CCDS DB by Nucleotide ID:ENST00000218006Re-query CCDS DB by Protein ID:ENSP00000218006
Original member Current member NCBI NM_001522.3 NP_001513.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001522.3Link to Protein Sequence:NP_001513.2Re-query CCDS DB by Nucleotide ID:NM_001522Re-query CCDS DB by Protein ID:NP_001513Link to BLAST:NP_001513.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001513.2 1108 P51841 1108 100% 0 0

Chromosomal Locations for CCDS 14545.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 109375899 109375986 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 109376079 109376167 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 109382118 109382212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 109385184 109385282 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 109388489 109388663 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 109391911 109392103 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 109392892 109393055 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 109395341 109395489 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 109398549 109398698 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 109404328 109404484 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 109408992 109409168 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 109430307 109430396 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 109441351 109441482 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 109448069 109448165 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 109452023 109452107 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 109453505 109453859 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 109465142 109465443 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 109475207 109475936 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3327 nt):
ATGTTCCTGGGACTCGGGCGCTTTTCTCGCCTTGTTCTCTGGTTTGCGGCTTTCAGGAAACTGCTGGGAC
AC
CATGGCCTTGCATCTGCCAAGTTCCTGTGGTGCTTGTGCCTTCTGTCTGTCATGTCCCTTCCGCAGCA
G
GTGTGGACACTCCCCTACAAGATAGGGGTGGTGGGCCCTTGGGCTTGTGATTCGCTGTTTTCAAAGGCC
CTG
CCTGAGGTTGCTGCGCGATTAGCCATTGAGCGAATCAACCGGGACCCATCTTTTGACCTGAGTTATT
CT
TTTGAATACGTGATTCTCAATGAAGACTGCCAGACTTCGAGGGCTCTCTCCAGTTTCATTTCCCACCA
C
CAGATGGCCTCAGGATTTATTGGACCTACCAACCCTGGCTACTGCGAGGCAGCCTCGCTCCTGGGAAAC
AGC
TGGGACAAAGGAATTTTCTCTTGGGCTTGTGTGAATTATGAATTAGACAATAAAATTAGCTACCCGA
CC
TTTTCTCGGACACTCCCTTCTCCCATCCGGGTGCTTGTAACTGTCATGAAATATTTCCAGTGGGCTCA
T
GCTGGAGTCATTTCCTCAGATGAAGACATTTGGGTGCATACAGCCAATCGAGTCGCAAGTGCTCTTCGG
AGC
CACGGCTTACCTGTAGGGGTCGTCCTGACCACAGGACAAGACAGCCAAAGCATGCGGAAAGCCCTCC
AG
AGGATTCACCAGGCAGACAGAATTCGCATAATCATCATGTGTATGCATTCAGCTTTGATTGGGGGAGA
G
ACTCAGATGCATCTCTTGGAATGTGCTCATGATCTGAAAATGACTGATGGAACCTACGTCTTTGTTCCT
TAT
GATGCCCTGCTCTACAGTTTACCTTATAAGCACACCCCCTACCGGGTCCTAAGGAACAACCCAAAGC
TC
CGGGAAGCCTATGATGCAGTGTTGACCATTACAGTGGAGTCCCAAGAAAAGACCTTCTATCAAGCCTT
C
ACAGAGGCAGCAGCAAGAGGTGAAATTCCTGAGAAGCTGGAGTTCGATCAAGTTTCACCGTTGTTTGGA
ACC
ATCTACAATTCAATTTACTTTATCGCACAAGCCATGAATAATGCTATGAAAGAAAATGGACAGGCTG
GT
GCTGCCAGCCTGGTTCAGCATTCCAGAAACATGCAGTTCCATGGATTCAACCAGTTGATGAGGACAGA
T
TCAAATGGAAATGGAATTTCAGAATATGTAATCCTGGACACCAACTTGAAAGAATGGGAACTCCATAGC
ACC
TACACTGTGGACATGGAAATGGAGCTGCTACGTTTCGGAGGGACCCCTATTCACTTCCCTGGTGGCA
GG
CCCCCTAGAGCAGATGCAAAATGCTGGTTTGCAGAAGGGAAGATCTGCCATGGAGGCATCGACCCTGC
C
TTTGCCATGATGGTCTGCCTTACTTTGCTTATAGCCCTGCTGTCTATTAATGGATTTGCTTACTTTATA
AG
G
CGTCGTATAAATAAAATCCAGTTGATCAAAGGACCCAATAGAATTCTACTGACTTTGGAGGATGTAA
CG
TTTATCAATCCCCACTTTGGCAGTAAGAGAGGAAGTCGTGCCAGTGTAAGCTTCCAGATTACCTCAGA
G
GTCCAAAGTGGGAGGTCCCCAAGACTCTCCTTTTCTTCAGGGAGTCTAACTCCAGCTACCTATGAAAAC
TCC
AACATAGCGATTTATGAGGGTGATTGGGTGTGGCTGAAAAAGTTCTCCCTTGGAGATTTTGGAGACC
TT
AAGTCCATCAAATCAAGAGCAAGTGATGTGTTCGAAATGATGAAGGACTTGCGTCATGAGAATATTAA
C
CCTTTATTGGGTTTCTTCTATGATTCGGGGATGTTTGCCATTGTGACAGAATTCTGTTCCCGAGGGAGC
CTA
GAAGACATACTGACAAATCAAGATGTGAAACTTGACTGGATGTTTAAATCATCACTCTTGCTGGATC
TC
ATAAAGGGCATGAAGTACTTACACCACAGAGAGTTTGTTCATGGGAGGCTAAAGTCTCGAAACTGTGT
G
GTAGATGGGCGTTTTGTACTAAAAGTGACAGATTATGGCTTTAACGACATCTTAGAAATGCTGAGACTC
TCT
GAAGAGGAATCTTCTATGGAAGAGCTGCTGTGGACGGCCCCTGAACTGTTGAGAGCTCCAAGAGGCA
GC
AGGTTAGGTTCTTTTGCAGGAGATGTCTATAGCTTTGCCATCATCATGCAAGAAGTGATGGTCCGGGG
T
ACCCCATTCTGCATGATGGATCTGCCAGCTCAAGAAATCATAAACAGACTTAAGAAGCCTCCTCCTGTG
TAC
AGACCAGTAGTTCCTCCTGAGCATGCCCCTCCAGAATGTCTCCAGCTGATGAAGCAGTGCTGGGCTG
AG
GCTGCAGAACAACGACCAACTTTTGATGAAATATTTAACCAGTTTAAAACTTTTAATAAAGGGAAGAA
G
ACCAATATTATTGATTCTATGCTTCGGATGTTGGAGCAATATTCTAGCAACTTGGAAGATTTGATTCGG
GAG
CGGACTGAAGAGCTGGAAATTGAAAAACAGAAAACGGAAAAGCTTCTAACACAGATGCTACCACCAT
CA
GTTGCTGAATCTCTCAAAAAGGGCTGCACAGTTGAACCTGAGGGCTTTGACTTGGTCACCTTGTACTT
C
AGCGACATTGTGGGCTTCACAACCATTTCAGCCATGAGTGAGCCCATTGAGGTCGTGGATCTTCTGAAT
GAC
CTGTACACACTCTTTGATGCAATAATTGGCAGTCATGATGTCTACAAGGTAGAGACCATTGGAGATG
CC
TACATGGTGGCTTCAGGCCTCCCAAAGAGGAATGGCAGTAGGCATGCAGCTGAGATTGCAAACATGTC
C
TTAGATATCCTGAGCTCTGTGGGCACTTTCAAGATGCGGCACATGCCAGAAGTGCCGGTCCGAATTCGA
ATT
GGCCTTCACTCAGGGCCGGTTGTTGCTGGAGTGGTGGGCCTCACCATGCCCAGATACTGCTTGTTTG
GA
GACACTGTGAACACAGCTTCTCGGATGGAATCTACAGGCTTACCTTATCGCATTCATGTCAGTCTCAG
C
ACTGTTACAATTCTTCAAAATCTGAGTGAGGGCTATGAAGTGGAGCTTCGAGGAAGAACAGAGCTCAAG
GGC
AAAGGCACAGAGGAAACCTTCTGGCTGATTGGGAAAAAAGGCTTCATGAAGCCCCTTCCTGTGCCCC
CA
CCAGTGGACAAAGATGGGCAAGTGGGCCATGGCCTGCAACCAGTGGAGATTGCAGCCTTCCAAAGAAG
A
AAAGCAGAAAGGCAGTTGGTGAGAAACAAGCCATAA


Translation (1108 aa):
MFLGLGRFSRLVLWFAAFRKLLGHHGLASAKFLWCLCLLSVMSLPQQVWTLPYKIGVVGPWACDSLFSKA
L
PEVAARLAIERINRDPSFDLSYSFEYVILNEDCQTSRALSSFISHHQMASGFIGPTNPGYCEAASLLGN
S
WDKGIFSWACVNYELDNKISYPTFSRTLPSPIRVLVTVMKYFQWAHAGVISSDEDIWVHTANRVASALR
S
HGLPVGVVLTTGQDSQSMRKALQRIHQADRIR
IIIMCMHSALIGGETQMHLLECAHDLKMTDGTYVFVP
Y
DALLYSLPYKHTPYRVLRNNPKLREAYDAVLTITVESQEKTFYQAFTEAAARGEIPEKLEFDQ
VSPLFG
T
IYNSIYFIAQAMNNAMKENGQAGAASLVQHSRNMQFHGFNQLMRTDSNGNGISEYVILDTNLKEWELHS
T
YTVDMEMELLRFGGTPIHFPGGRPPRADAKCWFAEGKICHG
GIDPAFAMMVCLTLLIALLSINGFAYFI
R
RRINKIQLIKGPNRILLTLEDVTFINPHFGSKRGSRASVSFQITSEVQSGRSPRLSFSSGSLTPATYEN
S
NIAIYE
GDWVWLKKFSLGDFGDLKSIKSRASDVFEMMKDLRHENINPLLGFFYDSGMFAIVTEFCSRGS
L
EDILTNQDVKLDWMFKSSLLLDLIK
GMKYLHHREFVHGRLKSRNCVVDGRFVLKVTDYGFNDILEMLRL
S
EEESSME
ELLWTAPELLRAPRGSRLGSFAGDVYSFAIIMQEVMVRGTPFCMMDLPAQEIINRLKKPPPV
Y
RPVVPPEHAPPECLQLMKQCWAEAAEQRPTFDEIFNQ
FKTFNKGKKTNIIDSMLRMLEQYSSNLEDLIR
E
RTEELEIEKQKTEKLLTQMLP
PSVAESLKKGCTVEPEGFDLVTLYFSDIVGFTTISAMSEPIEVVDLLN
D
LYTLFDAIIGSHDVYK
VETIGDAYMVASGLPKRNGSRHAAEIANMSLDILSSVGTFKMRHMPEVPVRIR
I
GLHS
GPVVAGVVGLTMPRYCLFGDTVNTASRMESTGLPYRIHVSLSTVTILQNLSEGYEVELRGRTELK
G
KGTEETFWLIGKKGFMKPLPVPPPVDKD
GQVGHGLQPVEIAAFQRRKAERQLVRNKP



Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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