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Report for CCDS14549.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14549.1 Public Homo sapiens X ACSL4 24 110 108 CCDS HistoryNCBI Gene:2182Re-query CCDS DB by CCDS ID:14549.1Re-query CCDS DB by GeneID:2182See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14549.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000348502.10 ENSP00000262835.7 Accepted alive Link to Ensembl Transcript Viewer:ENST00000348502.10Link to Ensembl Protein Viewer:ENSP00000262835.7Re-query CCDS DB by Nucleotide ID:ENST00000348502Re-query CCDS DB by Protein ID:ENSP00000262835
Original member Current member EBI ENST00000673016.1 ENSP00000499969.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000673016.1Link to Ensembl Protein Viewer:ENSP00000499969.1Re-query CCDS DB by Nucleotide ID:ENST00000673016Re-query CCDS DB by Protein ID:ENSP00000499969
Original member Current member EBI ENST00000672401.1 ENSP00000500273.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000672401.1Link to Ensembl Protein Viewer:ENSP00000500273.1Re-query CCDS DB by Nucleotide ID:ENST00000672401Re-query CCDS DB by Protein ID:ENSP00000500273
Original member Current member EBI ENST00000672282.1 ENSP00000500678.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000672282.1Link to Ensembl Protein Viewer:ENSP00000500678.1Re-query CCDS DB by Nucleotide ID:ENST00000672282Re-query CCDS DB by Protein ID:ENSP00000500678
Original member Current member NCBI NM_001318510.2 NP_001305439.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001318510.2Link to Protein Sequence:NP_001305439.1Re-query CCDS DB by Nucleotide ID:NM_001318510Re-query CCDS DB by Protein ID:NP_001305439Link to BLAST:NP_001305439.1
Original member Current member NCBI NM_004458.3 NP_004449.1 Accepted alive Link to Nucleotide Sequence:NM_004458.3Link to Protein Sequence:NP_004449.1Re-query CCDS DB by Nucleotide ID:NM_004458Re-query CCDS DB by Protein ID:NP_004449Link to BLAST:NP_004449.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001305439.1 670 O60488-2 670 100% 0 0
NP_004449.1 670 O60488-2 670 100% 0 0

Chromosomal Locations for CCDS 14549.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 109644029 109644186 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 109659354 109659511 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 109661531 109661645 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 109663211 109663402 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 109665420 109665494 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 109668101 109668273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 109669034 109669173 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 109674402 109674473 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 109677988 109678111 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 109678265 109678415 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 109680998 109681136 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 109681266 109681375 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 109682719 109682896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 109683136 109683363 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2013 nt):
ATGGCAAAGAGAATAAAAGCTAAGCCCACTTCAGACAAACCTGGAAGTCCATATCGCTCTGTCACACACT
TC
GACTCACTAGCTGTAATAGACATCCCTGGAGCAGATACTCTGGATAAATTATTTGACCATGCTGTATC
C
AAGTTTGGGAAGAAGGACAGCCTTGGGACCAGGGAAATCCTAAGTGAAGAAAATGAAATGCAGCCAAAT
GGA
AAAGTTTTTAAGAAGTTAATTCTTGGGAATTATAAATGGATGAACTATCTTGAAGTGAATCGCAGAG
TG
AATAACTTTGGTAGTGGACTCACTGCACTGGGACTAAAACCAAAGAACACCATTGCCATCTTCTGTGA
G
ACCAGGGCCGAATGGATGATTGCAGCACAGACCTGCTTTAAGTACAACTTTCCTCTTGTGACTTTATAT
GCC
ACACTTGGCAAAGAAGCAGTAGTTCATGGGCTAAATGAATCTGAGGCTTCCTATCTGATTACCAGTG
TT
GAACTTCTGGAAAGTAAACTTAAGACTGCATTGTTAGATATCAGTTGTGTTAAACATATCATTTATGT
G
GACAATAAGGCTATCAATAAAGCAGAGTACCCTGAAGGATTTGAGATTCACAGCATGCAATCAGTAGAA
GAG
TTGGGATCTAACCCAGAAAACTTGGGCATTCCTCCAAGTAGACCAACGCCTTCAGACATGGCCATTG
TT
ATGTATACTAGTGGTTCTACTGGCCGACCTAAGGGAGTGATGATGCATCATAGCAATTTGATAGCTGG
A
ATGACAGGCCAGTGTGAAAGAATACCTGGACTGGGACCGAAGGACACATATATTGGCTACTTGCCTTTG
GCT
CATGTGCTAGAACTGACAGCAGAGATATCTTGCTTTACCTATGGCTGCAGGATTGGATATTCTTCTC
CG
CTTACACTCTCTGACCAGTCCAGCAAAATTAAAAAAGGAAGCAAAGGAGACTGTACTGTACTGAAGCC
C
ACACTTATGGCTGCTGTTCCGGAAATCATGGATAGAATTTATAAGAATGTTATGAGCAAAGTCCAAGAG
ATG
AATTATATTCAGAAAACTCTGTTCAAGATAGGGTATGATTACAAATTGGAACAGATCAAAAAGGGAT
AT
GATGCACCTCTTTGCAATCTGTTACTGTTTAAAAAGGTCAAGGCCCTGCTGGGAGGGAATGTCCGCAT
G
ATGCTGTCTGGAGGGGCCCCGCTATCTCCTCAGACACACCGATTCATGAATGTCTGCTTCTGCTGCCCA
ATT
GGCCAGGGTTATGGACTGACAGAATCATGTGGTGCTGGGACAGTTACTGAAGTAACTGACTATACTA
CT
GGCAGAGTTGGAGCACCTCTTATTTGCTGTGAAATTAAGCTAAAAGACTGGCAAGAAGGCGGTTATAC
A
ATTAATGACAAGCCAAACCCCAGAGGTGAAATCGTAATTGGTGGACAGAACATCTCCATGGGATATTTT
AAA
AATGAAGAGAAAACAGCAGAAGATTATTCTGTGGATGAAAATGGACAAAGGTGGTTTTGCACTGGTG
AT
ATTGGAGAATTCCATCCCGATGGATGTTTACAGATTATAGATCGTAAGAAAGATCTAGTGAAGTTACA
A
GCAGGAGAGTATGTATCTCTTGGGAAAGTAGAAGCTGCACTGAAGAATTGTCCACTTATTGACAACATC
TGT
GCTTTTGCCAAAAGTGATCAGTCCTATGTGATCAGTTTTGTGGTTCCTAACCAGAAAAGGTTGACAC
TT
TTGGCACAACAGAAAGGGGTAGAAGGAACTTGGGTTGATATCTGCAATAATCCTGCTATGGAAGCTGA
A
ATACTGAAAGAAATTCGAGAAGCTGCAAATGCCATGAAATTGGAGCGATTTGAAATTCCAATCAAGGTT
CGA
TTAAGCCCAGAGCCATGGACCCCTGAAACTGGTTTGGTAACTGATGCTTTCAAACTGAAAAGGAAGG
AG
CTGAGGAACCATTACCTCAAAGACATTGAACGAATGTATGGGGGCAAATAA


Translation (670 aa):
MAKRIKAKPTSDKPGSPYRSVTHFDSLAVIDIPGADTLDKLFDHAVSKFGKKDSLGTREILSEENEMQPN
G
KVFKK
LILGNYKWMNYLEVNRRVNNFGSGLTALGLKPKNTIAIFCETRAEWMIAAQTCFKYNFPLVTLY
A
TLGKEAVVHGLNESEASYLITSVELLESKLK
TALLDISCVKHIIYVDNKAINKAEYPEGFEIHSMQSVE
E
LGSNPEN
LGIPPSRPTPSDMAIVMYTSGSTGRPKGVMMHHSNLIAGMTGQCERIPGLGPKDTYIGYLPL
A
HVLELTAEISCFTYGCRIGYSSPLTLSDQ
SSKIKKGSKGDCTVLKPTLMAAVPEIMDRIYKNVMSKVQE
M
NYIQKTLFKIGYDYKLEQIKKGYDAPLCN
LLLFKKVKALLGGNVRMMLSGGAPLSPQTHRFMNVCFCCP
I
GQGYGLTESCGAGTVTE
VTDYTTGRVGAPLICCEIKLKDWQEGGYTINDKPNPRGEIVIGGQNISMGYF
K
NEEKTAEDYSVDENGQRWFCTGDIGEFHPDGCLQII
DRKKDLVKLQAGEYVSLGKVEAALKNCPLIDNI
C
AFAK
SDQSYVISFVVPNQKRLTLLAQQKGVEGTWVDICNNPAMEAEILKEIREAANAMKLERFEIPIKV
R
LSPEPWTPETGLVTDAFKLKRKELRNHYLKDIERMYGGK




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
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