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Report for CCDS14947.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14947.1 Public Mus musculus 1 Inpp1 23 108 98 CCDS HistoryNCBI Gene:16329Re-query CCDS DB by CCDS ID:14947.1Re-query CCDS DB by GeneID:16329See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14947.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000027271.8 ENSMUSP00000027271.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000027271.8Link to Ensembl Protein Viewer:ENSMUSP00000027271.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000027271Re-query CCDS DB by Protein ID:ENSMUSP00000027271
Original member Current member NCBI NM_008384.2 NP_032410.2 Accepted alive Link to Nucleotide Sequence:NM_008384.2Link to Protein Sequence:NP_032410.2Re-query CCDS DB by Nucleotide ID:NM_008384Re-query CCDS DB by Protein ID:NP_032410Link to BLAST:NP_032410.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032410.2 396 P49442 396 100% 0 0

Chromosomal Locations for CCDS 14947.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 52789668 52790217 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52791688 52791862 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52794470 52794670 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52797041 52797101 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52799285 52799488 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1191 nt):
ATGTCAGACATCCTCCTGGAGCTGCTCTGTGTCTCCGAGAAGGCTGCTAACATCGCCAGGGCGTGCAGGC
AGCAGGAGACCCTCTTCCAGCTGCTCATTGAGGAGAAGAAAGGTGCAGAGAAGAACAAGAAGTTTGCTGC
AGATTTCAAGACCCTGGCGGATGTGCTGGTGCAGGAAGTTATAAAACAGAACATGGAAAACAAGTTTCCA
GGCTTGGGGAAAAAAGTTTTTGGAGAAGAATCCAATGAGTTTACAAATGATTTGGGGGAAAAGATCACAG
TGGAGCTGCAGTCCACGGAGGAGGAGACGGCAGAGCTTCTCAGCAAGGTCCTTAACGGCAACATGCCGGC
ATCGGAAGCGCTGGCTCAGGTGGTTCATGAGGACGTGGACTTAACTGATCCCACGCTGGAGTCCCTGGAC
ATCAGCATCCCTCACGAGAGTCTTGGGATTTGGGTGGATCCCATTGATTCAACCTATCAGTATATTAAAG
GTTCTGCCAATGTTAAATCCAACCAAGGAATTTTCCCCAGCGGACTTCAGTGTGTAACCATTTTAATTGG
CGTGTATGACCTACAGACAGGCCTGCCCCTAATGGGAGTCATCAATCAGCCTTTTGCGTCCCAAAACCTA
ACTACTTTAAGGTGGAAGGGACAGTGCTACTGGGGCCTTTCGTACATGGGGACCAACATCCATTCCCTGC
AGCTCGCCATCTCTAAAAGCGACAGTGAAACCCAGACTGAAAACTCGGACAGAGAGTTCTCCAGCCCCTT
TTCTGCAGTCATCAGTACCAGCGAAAAAGACACCATCAAAGCTGCTCTTTCGCGCGTGTGCGGAGGTAGC
GTCTTCCCCGCGGCAGGGGCTGGCTACAAGAGCCTCTGTGTAATCCAGGGCTTGGCTGACATTTACATCT
TCTCAGAGGACACCACGTACAAGTGGGACTCCTGTGCCGCCCACGCCATTCTGAGGGCCATGGGTGGGGG
CATTGTAGACATGAAAGAGTGCTTAGAGAGAAGTCCAGACACGGGGTTGGATTTGCCACAGCTGCTGTAT
CATGTGGAAAATAAAGGTGCTTCTGGGGTGGAACTCTGGGCCAACAAGGGAGGGCTGATAGCTTACAGGT
CCAGGAATCGGCTGGACACCTTCCTGAGCCGCCTCATCCAAAACCTCGGGCCTGTAAAGACACAAGCATA
A

Translation (396 aa):
MSDILLELLCVSEKAANIARACRQQETLFQLLIEEKKGAEKNKKFAADFKTLADVLVQEVIKQNMENKFP
GLGKKVFGEESNEFTNDLGEKITVELQSTEEETAELLSKVLNGNMPASEALAQVVHEDVDLTDPTLESLD
ISIPHESLGIWVDPIDSTYQYIKGSANVKSNQGIFPSGLQCVTILIGVYDLQTGLPLMGVINQPFASQNL
TTLRWKGQCYWGLSYMGTNIHSLQLAISKSDSETQTENSDREFSSPFSAVISTSEKDTIKAALSRVCGGS
VFPAAGAGYKSLCVIQGLADIYIFSEDTTYKWDSCAAHAILRAMGGGIVDMKECLERSPDTGLDLPQLLY
HVENKGASGVELWANKGGLIAYRSRNRLDTFLSRLIQNLGPVKTQA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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