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Report for CCDS15167.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15167.1 Public Mus musculus 1 Ndufa10 23 108 98 CCDS HistoryNCBI Gene:67273Re-query CCDS DB by CCDS ID:15167.1Re-query CCDS DB by GeneID:67273See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15167.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000027478.6 ENSMUSP00000027478.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000027478.6Link to Ensembl Protein Viewer:ENSMUSP00000027478.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000027478Re-query CCDS DB by Protein ID:ENSMUSP00000027478
Original member Current member NCBI NM_024197.1 NP_077159.1 Accepted alive Link to Nucleotide Sequence:NM_024197.1Link to Protein Sequence:NP_077159.1Re-query CCDS DB by Nucleotide ID:NM_024197Re-query CCDS DB by Protein ID:NP_077159Link to BLAST:NP_077159.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_077159.1 355 Q99LC3 355 100% 0 0

Chromosomal Locations for CCDS 15167.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 92439839 92439907 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 92452011 92452119 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 92460380 92460465 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 92462291 92462345 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 92463078 92463157 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 92464361 92464482 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 92467381 92467467 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 92469863 92470078 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 92470817 92470985 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 92473663 92473737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1068 nt):
ATGGCCTTGAGGTTGCTGAGACTCGTCCCGGCGTCGGCTCCCGCGCGCGGCCTCGCGGCCGGAGCCCAGC
GCGTGGGACGAATTCATACCAGTGTGCACTGCAAGCTGAGGTATGGGCTTTTGGCCGCCATTCTTGGTGA
TAAGACAACCAAAAAGCTGCATGAGTACAGCCGAGTGATAACAGTAGATGGGAACATATGCTCTGGGAAA
AACAAGCTCGCAAAGGAGATCGCACAGCAACTAGGCATGAAGCACTACCCAGAAGCAGGGATACAGTACT
CAAGCACCACCACAGGCGATGGAAGGCCCCTCGACATAGAGTTTAGTGGCAGCTGTAGTTTAGAGAAATT
TTATGATGATCCCAAGAGCAACGATGGCAACAGCTACCGCCTGCAGTCCTGGCTGTATGCCAGCCGCCTT
CTTCAGTATGCAGATGCCCTGGAGCACCTGCTGAGCACAGGACAAGGTGTGGTCTTGGAGCGCTCCATCT
ACAGTGACTTTGTCTTCCTGGAGGCAATGTACAACCAGGGCTATATCCGAAAGCAGTGTGTGGACCACTA
TAATGAAATTAAGCGGCTCACTCTCCCGGAGTACCTGCCACCACACGCAGTCATCTATATCGATGTGCCC
GTGCCGGAGGTACAGAGCAGGATCCAGAAGAAAGGAGATCCACATGAAATGAAGGTCACCTCTGCCTATC
TCCAGGACATCGAGAATGCGTACAAGAAAACCTTCCTCCCCAAAATGAGTGAAATGTGTGAGGTGTTGGT
GTACGATTCCTGGGAAGCTGAAGACCCAACCAAGGTGGTAGAGGACATTGAATACCTTAAGTACAACAAA
GGGCCTTGGCTGAAACAGGACGACTGGACCTTTCACTACCTGCGGATGCTGGTTCAGGATAAGACAGAAG
TGCTGAATTACACGACCATTCCGGTCTACCTCCCAGAAATCACTATTGGAGCTCATCAGGGTAGCCGGAT
CTACAACAGCTTCAGAGAGCTGCCAGGCCGCAAGTATGCCCCTGGGTACAATGCCGAGGTGGGTGACAAG
TGGATCTGGCTGAAGTGA

Translation (355 aa):
MALRLLRLVPASAPARGLAAGAQRVGRIHTSVHCKLRYGLLAAILGDKTTKKLHEYSRVITVDGNICSGK
NKLAKEIAQQLGMKHYPEAGIQYSSTTTGDGRPLDIEFSGSCSLEKFYDDPKSNDGNSYRLQSWLYASRL
LQYADALEHLLSTGQGVVLERSIYSDFVFLEAMYNQGYIRKQCVDHYNEIKRLTLPEYLPPHAVIYIDVP
VPEVQSRIQKKGDPHEMKVTSAYLQDIENAYKKTFLPKMSEMCEVLVYDSWEAEDPTKVVEDIEYLKYNK
GPWLKQDDWTFHYLRMLVQDKTEVLNYTTIPVYLPEITIGAHQGSRIYNSFRELPGRKYAPGYNAEVGDK
WIWLK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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