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Report for CCDS15555.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15555.1 Public Mus musculus 1 Adss2 23 108 98 CCDS HistoryNCBI Gene:11566Re-query CCDS DB by CCDS ID:15555.1Re-query CCDS DB by GeneID:11566See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15555.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000016105.8 ENSMUSP00000016105.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000016105.8Link to Ensembl Protein Viewer:ENSMUSP00000016105.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000016105Re-query CCDS DB by Protein ID:ENSMUSP00000016105
Original member NCBI NM_007422.3 NP_031448.2 Updated not alive Link to Nucleotide Sequence:NM_007422.3Link to Protein Sequence:NP_031448.2Re-query CCDS DB by Nucleotide ID:NM_007422Re-query CCDS DB by Protein ID:NP_031448
Current member NCBI NM_007422.4 NP_031448.2 Accepted alive Link to Nucleotide Sequence:NM_007422.4Link to Protein Sequence:NP_031448.2Re-query CCDS DB by Nucleotide ID:NM_007422Re-query CCDS DB by Protein ID:NP_031448Link to BLAST:NP_031448.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_031448.2 456 P46664 456 100% 0 0

Chromosomal Locations for CCDS 15555.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 177764245 177764297 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 177767655 177767804 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 177769925 177770022 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 177771141 177771265 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 177772072 177772226 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 177773575 177773701 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 177775581 177775662 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 177776457 177776564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 177776813 177776879 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 177782843 177782893 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 177784049 177784117 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 177784896 177784998 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 177796212 177796394 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1371 nt):
ATGTCGATCTCCGAGAGCAGCCCGGCGGCCACCTCCCTGCCCAACGGCGACTGTGGCCGCCCCAGGGCGC
GGTCCGGAGGGAACCGGGTGACTGTGGTGCTGGGAGCGCAGTGGGGCGACGAGGGCAAAGGGAAGGTGGT
GGATCTACTGGCGCAGGACGCCGACATCGTGTGCCGCTGCCAGGGAGGGAATAACGCTGGCCACACAGTT
GTCGTAGATTCTGTGGAATATGACTTTCATCTTTTACCTAGTGGAATAATTAACCCAAATGTTACTGCCT
TTATCGGAAATGGAGTGGTAATTCATCTTCCTGGATTGTTTGAAGAAGCGGAGAAAAATGTTCAGAAGGG
AAAAGGTCTAGATGGCTGGGAGAAAAGGCTTATCATATCGGACAGAGCTCATATTGTGTTTGACTTTCAT
CAAGCAGCTGATGGTATCCAGGAACAGCAGAGACAAGAGCAAGCAGGAAAAAATTTGGGTACCACGAAAA
AGGGGATTGGCCCTGTGTATTCCTCTAAAGCTGCTCGGAGTGGACTTCGGATGTGTGATCTTGTTTCTGA
CTTTGATGGCTTCTCTGAGAGGTTCAAAGTTCTAGCTAACCAGTATAAATCTATATACCCGACTTTGGAA
ATAGACATTGAAGGTGAATTACAGCAACTCAAGGGTTATATGGAAAGGATTAAACCGATGGTGAAAGATG
GAGTTTATTTCCTATATGAGGCCCTCCATGGACCACCCAAGAAAATCTTGGTAGAAGGTGCAAACGCAGC
ATTGTTAGATATTGATTTTGGAACTTACCCTTTTGTAACCTCTTCAAACTGTACTGTTGGAGGTGTTTGT
ACAGGTTTGGGCATGCCCCCTCAAAATGTTGGAGAAGTATATGGAGTTGTGAAAGCTTACACCACTAGAG
TTGGTATTGGTGCCTTTCCCACAGAGCAAGACAATGAAATTGGAGAATTATTACAAACACGGGGTAGAGA
ATTTGGAGTAACTACTGGAAGGAAAAGAAGATGCGGCTGGTTGGACCTTGTTTCACTCAAATATGCTCAT
ATGATCAATGGATTTACTGCGTTGGCCCTTACCAAGTTGGATATTTTGGATATGTTTACGGAAATCAAAG
TTGGAGTTGCTTACAAATTAGATGGGGAAACCATACCTCATTTCCCAGCAAACCAAGAAGTCTTAAATAA
AGTGGAAGTTCAGTATAAGACTCTCCCAGGATGGAACACAGACATATCTAATGCAAGGACATTTAAGGAG
CTACCTGTCAACGCACAAAACTATGTTCGGTTTATTGAAGATGAGCTTCAAATACCAGTTAAATGGATTG
GTGTAGGTAAATCCAGAGAGTCCATGATTCAGCTCTTCTAA

Translation (456 aa):
MSISESSPAATSLPNGDCGRPRARSGGNRVTVVLGAQWGDEGKGKVVDLLAQDADIVCRCQGGNNAGHTV
VVDSVEYDFHLLPSGIINPNVTAFIGNGVVIHLPGLFEEAEKNVQKGKGLDGWEKRLIISDRAHIVFDFH
QAADGIQEQQRQEQAGKNLGTTKKGIGPVYSSKAARSGLRMCDLVSDFDGFSERFKVLANQYKSIYPTLE
IDIEGELQQLKGYMERIKPMVKDGVYFLYEALHGPPKKILVEGANAALLDIDFGTYPFVTSSNCTVGGVC
TGLGMPPQNVGEVYGVVKAYTTRVGIGAFPTEQDNEIGELLQTRGREFGVTTGRKRRCGWLDLVSLKYAH
MINGFTALALTKLDILDMFTEIKVGVAYKLDGETIPHFPANQEVLNKVEVQYKTLPGWNTDISNARTFKE
LPVNAQNYVRFIEDELQIPVKWIGVGKSRESMIQLF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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