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Report for CCDS15805.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15805.1 Public Mus musculus 2 Inpp5e 23 108 98 CCDS HistoryNCBI Gene:64436Re-query CCDS DB by CCDS ID:15805.1Re-query CCDS DB by GeneID:64436See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15805.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000145701.7 ENSMUSP00000119485.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000145701.7Link to Ensembl Protein Viewer:ENSMUSP00000119485.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000145701Re-query CCDS DB by Protein ID:ENSMUSP00000119485
Original member Current member NCBI NM_033134.3 NP_149125.1 Accepted alive Link to Nucleotide Sequence:NM_033134.3Link to Protein Sequence:NP_149125.1Re-query CCDS DB by Nucleotide ID:NM_033134Re-query CCDS DB by Protein ID:NP_149125Link to BLAST:NP_149125.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_149125.1 647 Q9JII1 647 100% 0 0

Chromosomal Locations for CCDS 15805.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 26397839 26397971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 26398556 26398692 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 26399233 26399348 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 26399413 26399574 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 26400036 26400143 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 26400373 26400492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 26400886 26401010 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 26401601 26401698 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 26402100 26402223 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 26407767 26408587 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1944 nt):
ATGCCATCCAAGTCAGCTTGCCTGCGTCACACTGAGGCACCTGGGCAGCTAGAAGGCAGAATGCTCCAGG
GACAGCCTCCGAACACGGAAAAGAAGCTCATCCCAACACCAGGCTTCTTACCAGCCTCTGACTCTCAGGG
TTCAGAGACAAACCCCATGCCTCCTTTCAGCATTCCAGCAAAAACAAGCAACCAGAACCCACAAACTAAG
GCAAATCTCATCACCCCACAGCCACCCATTAGACCCAAGTTGGAGCGAACCCTGTCCCTCGATGACAAGG
GCTGGAGAAGGAGGCGTTTCCGGGGTAGTCAGGAGGATCTGACTGTCCAGAATGGGGCCAGTCCCTGCAG
GGGCTCCTTGCAAGACTCAGTAGCCCAGTCCCCTGCCTACAGCCGTCCCCTGCCCTGCCTCAGCACATCC
TTGCAGGAGATACCTAAGTCCCGAAGGGCCACAGGCAGTGAGGGAGGGAGCCCATCCTTGTGGAGTGACT
GTCTTTCTGGAATGATCAGCACCTCCTTGGACCTCCTGCACAGAGATGCTGCCTCAGGTGGGCCCCCCTC
CAGGTTGGCAAGTTTGCATGCCTCACACACACCACCAGCTATGGACCTCAGCATAGCCTCCAGCTCCCTG
AGAACAGCAAACAAGGTTGACCCCGAGCACACGGACTACAAGCTCCGCATGCAGACCAGACTGGTCAGGG
CCCACAGCAACCTGGGCCCTAGCAGACCCCGGAGCCCCTTGGCTGGTGACGATCACTCCATTCACTCAGC
CAGATCTTTCAGCCTTCTGGCCCCCATCCGCACCAAGGACATCAGAAGCAGGAGCTATCTGGAGGGAAGT
CTTCTGGCCAGTGGGGCCCTGCTAGGAGCAGAAGAGCTGGCCAGGTACTTCCCAGACCGAAACATGGCTC
TCTTCGTGGCTACCTGGAACATGCAGGGCCAGAAGGAGCTCCCAGCGAGCCTGGATGAGTTTCTGCTCCC
CACCGAGGCTGACTACACTCAGGACCTGTATGTCATTGGAATTCAGGAGGGCTGCTCTGACAGGCGGGAG
TGGGAGACACGCCTGCAGGAGACACTGGGCCCTCAGTATGTACTGCTGTCATCAGCAGCACATGGGGTCC
TGTACATGTCCCTGTTTATCCGTAGGGACCTCATCTGGTTCTGCTCAGAGGTCGAGTACTCCACAGTAAC
TACACGCATCGTGTCTCAGATCAAGACCAAGGGGGCCCTGGGCGTCAGCTTCACCTTTTTTGGCACCTCC
TTCCTCTTCATCACATCTCACTTCACCTCTGGAGATGGGAAGGTAGCAGAGCGGCTACTGGACTACAGCA
GAACCATCCAAGCCCTAGCCCTGCCCCGGAATGTGCCAGACACAAATCCCTACCGCTCTAGTGCAGGGGA
TGTCACTACCCGGTTTGATGAGGTCTTCTGGTTTGGGGACTTCAACTTCCGCCTGAGTGGTGGACGAGTG
GCTGTGGAGGCCTTCCTGAAGCAGAAACCTGAGGTGGATGTGCTGGCTCTCCTCCAACACGACCAGCTCA
CCCGGGAGATGAAGAAAGGGTCCATCTTCAGGGGCTTTGAGGAGGCAGAGATTCACTTTCTTCCATCCTA
CAAGTTTGACATTGGGAAGGACACCTACGACAGCACCTCCAAGCAAAGGACACCCTCCTACACAGACCGA
GTCCTATACAAAAGCCGTCACAAGGGTGACATCTGTCCCATGAAGTATTCCTCTTGTCCTGGGATCAAGA
CTTCAGACCACCGTCCTGTGTATGGCTTGTTCCAGGTGAAAGTGAGGCCAGGACGAGACAACATCCCATT
AGCTGCCGGCAAGTTTGACCGAGAATTGTACTTGATAGGAATTAAAAGGCGGATTTCAAAGGAGATTCAG
AGACAGGAAGCACTGAAGAGCCAGAGCTCCAGTGCAGTTTGCACCGTGTCCTGA

Translation (647 aa):
MPSKSACLRHTEAPGQLEGRMLQGQPPNTEKKLIPTPGFLPASDSQGSETNPMPPFSIPAKTSNQNPQTK
ANLITPQPPIRPKLERTLSLDDKGWRRRRFRGSQEDLTVQNGASPCRGSLQDSVAQSPAYSRPLPCLSTS
LQEIPKSRRATGSEGGSPSLWSDCLSGMISTSLDLLHRDAASGGPPSRLASLHASHTPPAMDLSIASSSL
RTANKVDPEHTDYKLRMQTRLVRAHSNLGPSRPRSPLAGDDHSIHSARSFSLLAPIRTKDIRSRSYLEGS
LLASGALLGAEELARYFPDRNMALFVATWNMQGQKELPASLDEFLLPTEADYTQDLYVIGIQEGCSDRRE
WETRLQETLGPQYVLLSSAAHGVLYMSLFIRRDLIWFCSEVEYSTVTTRIVSQIKTKGALGVSFTFFGTS
FLFITSHFTSGDGKVAERLLDYSRTIQALALPRNVPDTNPYRSSAGDVTTRFDEVFWFGDFNFRLSGGRV
AVEAFLKQKPEVDVLALLQHDQLTREMKKGSIFRGFEEAEIHFLPSYKFDIGKDTYDSTSKQRTPSYTDR
VLYKSRHKGDICPMKYSSCPGIKTSDHRPVYGLFQVKVRPGRDNIPLAAGKFDRELYLIGIKRRISKEIQ
RQEALKSQSSSAVCTVS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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