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Report for CCDS16441.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
16441.1 Public Mus musculus 2 Dgkz 23 108 98 CCDS HistoryNCBI Gene:104418Re-query CCDS DB by CCDS ID:16441.1Re-query CCDS DB by GeneID:104418See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 16441.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000028667.9 ENSMUSP00000028667.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000028667.9Link to Ensembl Protein Viewer:ENSMUSP00000028667.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000028667Re-query CCDS DB by Protein ID:ENSMUSP00000028667
Original member Current member NCBI NM_138306.2 NP_612179.2 Accepted alive Link to Nucleotide Sequence:NM_138306.2Link to Protein Sequence:NP_612179.2Re-query CCDS DB by Nucleotide ID:NM_138306Re-query CCDS DB by Protein ID:NP_612179Link to BLAST:NP_612179.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_612179.2 929 Q80UP3 929 100% 0 0

Chromosomal Locations for CCDS 16441.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 91933409 91933525 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91933743 91933842 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91934056 91934089 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91934166 91934286 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91934816 91934859 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91935081 91935112 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91935822 91935961 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91936525 91936565 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91936702 91936771 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91936858 91936937 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91937054 91937154 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91937438 91937637 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91937968 91938079 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91938162 91938235 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91938329 91938391 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91938509 91938564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91938717 91938795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91939324 91939464 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91939551 91939664 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91939753 91939813 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91939910 91939992 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91940248 91940343 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91940605 91940676 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91940758 91940874 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91940965 91941036 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91942290 91942358 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91942628 91942684 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91944022 91944099 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91944374 91944469 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91944761 91944869 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91963286 91963446 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2790 nt):
ATGGAGCCGCGGGACCCCAGCCCCGAGGGCCGGAGCAGCGACTCGGAGTCGGCCTCCGCCTCGTCCAGCG
GCTCCGAGCGCGACGCGGGTCCGGAGCCCGACAAGGCGCCGCGGCGCCTGACCAAGCGGCGCTTCCCGGG
GCTGCGGCTCTTTGGGCACAGGAAAGCCATCACCAAGTCGGGCCTCCAGCACCTGGCACCCCCTCCTCCC
ACGCCCGGGGCCCCGTGCGGTGAATCTGAGGAGCAGATCCAGAGCACTGTGGACTGGAGTGAGTCAGCAG
TGTATGGGGAGCACATCTGGTTTGAGACCAACGTGTCCGGTGACTTCTGCTATGTCGGGGAGCAGCACTG
TGTAGCTAAGATGCTGCCGAAGTCAGCGCCCAGAAAAAAGTGTGCAGCCTGTAAGATCGTGGTGCATACC
CAATGCATTAAGCAGCTGGAAAAGATCAATTTCCGCTGTAAGCCGTCCTTCCGCGAATCAGGCTCCAGGA
ATGTCCGTGAGCCAACCTTCGTAAGACACCACTGGGTCCACAGACGACGCCAGGATGGCAAGTGTCGGCA
CTGTGGGAAGGGCTTCCAGCAGAAGTTCACCTTCCACAGCAAGGAGATCGTAGCCATCAGCTGCTCCTGG
TGCAAACAGGCATACCACAGCAAGGTGTCGTGCTTCATGATGCAACAGATTGAGGAACCCTGCTCCCTAG
GGGTGCATGCAGCCGTGGTCATCCCACCCACCTGGATCCTGCGGGCCCGGAGGCCCCAGAACACCCTCAA
GGCCAGCAAGAAGAAAAAGAGAGCGTCCTTCAAGAGGAGGTCCAGCAAGAAAGGACCTGAGGAAGGCCGC
TGGAGACCCTTCATCATCAGACCCACCCCATCCCCCCTCATGAAACCCCTGCTGGTGTTTGTGAACCCCA
AGAGTGGGGGCAACCAGGGTGCCAAGATCATCCAGTCTTTTTTGTGGTATCTGAATCCCCGACAAGTCTT
TGATCTGAGCCAGGGAGGACCCAGGGAAGCGCTGGAAATGTACCGCAAAGTACATAATTTGAGGATTCTG
GCTTGCGGGGGTGATGGCACGGTTGGCTGGATTCTCTCCACCCTGGACCAGCTGCGCTTAAAACCACCGC
CTCCTGTAGCCATCCTGCCTCTGGGCACTGGCAATGACCTGGCCCGAACCCTCAACTGGGGTGGGGGTTA
CACAGATGAGCCTGTGTCAAAGATCCTTTCCCATGTTGAGGAGGGGAATGTGGTACAGCTGGACCGTTGG
GACCTCCGAGCAGAGCCCAACCCTGAGGCGGGGCCTGAGGAGCGAGATGATGGAGCCACTGACCGGCTGC
CCCTGGATGTCTTTAACAACTACTTCAGCCTGGGCTTCGATGCCCACGTCACCCTGGAATTTCATGAGTC
TCGAGAAGCCAACCCAGAGAAGTTCAACAGCCGCTTTCGGAATAAGATGTTCTATGCTGGGACGGCCTTC
TCTGACTTCCTGATGGGCAGCTCCAAGGACTTAGCCAAGCACATCCGAGTAGTGTGTGACGGAATGGACC
TAACCCCCAAGATTCAGGACCTGAAACCGCAGTGCATCGTCTTTCTGAATATCCCCAGGTACTGTGCAGG
CACCATGCCCTGGGGCCACCCCGGGGAGCACCATGACTTCGAGCCCCAGAGGCATGATGATGGCTACCTG
GAGGTCATCGGCTTCACCATGACATCCTTGGCAGCACTGCAGGTGGGTGGGCACGGCGAGCGATTGACGC
AGTGCCGAGAAGTGCTGCTCACCACTGCCAAGGCCATCCCTGTGCAGGTGGACGGTGAGCCCTGCAAGCT
TTCAGCATCACGGATTCGAATTGCCCTGCGCAACCAGGCCACTATGGTGCAGAAGGCCAAGCGCCGGAGT
ACTGCCCCACTGCACAGCGACCAGCAGCCAGTTCCTGAGCAGCTGAGGATCCAGGTGAGCAGGGTCAGTA
TGCACGACTACGAGGCTCTACATTATGACAAGGAGCAGCTCAAGGAAGCCTCTGTGCCTCTGGGCACTGT
GGTGGTCCCCGGAGACAGTGACCTGGAGCTCTGCCGCGCCCACATTGAGAGACTGCAGCGGGAGCCCGAT
GGGGCTGGAGCCAAGTCCCCGATGTGCCACCAACTCTCCTCCAAGTGGTGTTTCCTGGATGCCACCACTG
CCAGCCGCTTCTACAGGATCGACAGAGCCCAGGAGCACCTCAACTATGTGACGGAGATTGCCCAGGACGA
GATTTACATCCTAGACCCAGAGCTTCTGGGAGCATCAGCCCGGCCTGACCTCCCCACCCCTACCTCCCCA
CTCCCTGCTTCCCCCTGCTCCCCTACACCCGGGTCAATGCAGGGGGACACTGCACTGCCCCAAGGTGAAG
AACTGATTGAAGCAGCCAAGAGGAATGACTGCTGCAAGCTCCAGGAGCTACACCGAGCAGGAGGTGACCT
CATGCACCGTGACCAGAAGAGCCGCACGCTCTTGCACCACGCGGTCAGCACTGGCAGTAAGGAAGTGGTC
CGCTATCTGCTGGATCATGCACCTCCAGAGATCCTTGATGCTGTGGAGGAGAATGGGGAGACCTGTCTAC
ACCAGGCAGCCGCCCTGGGTCAGCGCACCATCTGCCACTACATTGTGGAAGCCGGGGCCTCCCTCATGAA
GACAGATCTGCAGGGCGACACTCCCCGGCAGCGCGCTGAGAAGGCTCAAGACACAGAGCTCGCTGCCTAC
CTGGAGAACAGACAGCATTACCAGATGATCCAGCGTGAGGACCAGGAGACAGCTGTGTAG

Translation (929 aa):
MEPRDPSPEGRSSDSESASASSSGSERDAGPEPDKAPRRLTKRRFPGLRLFGHRKAITKSGLQHLAPPPP
TPGAPCGESEEQIQSTVDWSESAVYGEHIWFETNVSGDFCYVGEQHCVAKMLPKSAPRKKCAACKIVVHT
QCIKQLEKINFRCKPSFRESGSRNVREPTFVRHHWVHRRRQDGKCRHCGKGFQQKFTFHSKEIVAISCSW
CKQAYHSKVSCFMMQQIEEPCSLGVHAAVVIPPTWILRARRPQNTLKASKKKKRASFKRRSSKKGPEEGR
WRPFIIRPTPSPLMKPLLVFVNPKSGGNQGAKIIQSFLWYLNPRQVFDLSQGGPREALEMYRKVHNLRIL
ACGGDGTVGWILSTLDQLRLKPPPPVAILPLGTGNDLARTLNWGGGYTDEPVSKILSHVEEGNVVQLDRW
DLRAEPNPEAGPEERDDGATDRLPLDVFNNYFSLGFDAHVTLEFHESREANPEKFNSRFRNKMFYAGTAF
SDFLMGSSKDLAKHIRVVCDGMDLTPKIQDLKPQCIVFLNIPRYCAGTMPWGHPGEHHDFEPQRHDDGYL
EVIGFTMTSLAALQVGGHGERLTQCREVLLTTAKAIPVQVDGEPCKLSASRIRIALRNQATMVQKAKRRS
TAPLHSDQQPVPEQLRIQVSRVSMHDYEALHYDKEQLKEASVPLGTVVVPGDSDLELCRAHIERLQREPD
GAGAKSPMCHQLSSKWCFLDATTASRFYRIDRAQEHLNYVTEIAQDEIYILDPELLGASARPDLPTPTSP
LPASPCSPTPGSMQGDTALPQGEELIEAAKRNDCCKLQELHRAGGDLMHRDQKSRTLLHHAVSTGSKEVV
RYLLDHAPPEILDAVEENGETCLHQAAALGQRTICHYIVEAGASLMKTDLQGDTPRQRAEKAQDTELAAY
LENRQHYQMIQREDQETAV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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