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Report for CCDS16861.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
16861.1 Public Mus musculus 2 Entpd6 23 108 98 CCDS HistoryNCBI Gene:12497Re-query CCDS DB by CCDS ID:16861.1Re-query CCDS DB by GeneID:12497See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 16861.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000094467.5 ENSMUSP00000092038.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000094467.5Link to Ensembl Protein Viewer:ENSMUSP00000092038.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000094467Re-query CCDS DB by Protein ID:ENSMUSP00000092038
Original member Current member NCBI NM_001355068.1 NP_001341997.1 Accepted alive Link to Nucleotide Sequence:NM_001355068.1Link to Protein Sequence:NP_001341997.1Re-query CCDS DB by Nucleotide ID:NM_001355068Re-query CCDS DB by Protein ID:NP_001341997Link to BLAST:NP_001341997.1
Original member Current member NCBI NM_172117.5 NP_742115.2 Accepted alive Link to Nucleotide Sequence:NM_172117.5Link to Protein Sequence:NP_742115.2Re-query CCDS DB by Nucleotide ID:NM_172117Re-query CCDS DB by Protein ID:NP_742115Link to BLAST:NP_742115.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001341997.1 455 Q3U0P5 455 100% 0 0
NP_742115.2 455 Q3U0P5 455 100% 0 0

Chromosomal Locations for CCDS 16861.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 150753042 150753333 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 150756043 150756119 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 150758743 150758886 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 150760103 150760178 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 150761233 150761268 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 150762376 150762464 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 150763566 150763645 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 150764115 150764179 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 150765450 150765551 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 150766959 150767096 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 150768865 150768921 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 150770292 150770404 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 150770629 150770727 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1368 nt):
ATGAGAAAAATACCAAACCATGGGACCCTGCGGATGACGAAGGTGGCATATCCCCTGGGACTGTGCGTGG
GCCTGTTCATCTATGTTGCCTATATCAAGTGGCACCGGGCCTCTGCTGCCCAGGCCTTCTTCACCATTGC
TGGGGCTGCCTCGGGGGCACGGTGGACCCAGCAGGCCTTCAGCTCCCCAGGCTCAGCTGCACGTGGTCAT
GAGGTCTTCTATGGGATCATGTTTGACGCTGGGAGCACCGGCACCCGCATCCACGTCTTCCAGTTCGCCC
GGCCACCTGGAGAAACTCCCACCTTGACCCATGAAACCTTCAAAGCACTGAAGCCTGGGCTTTCTGCTTA
CGCTGATGATGTTGAAAAGAGTGCTCAGGGGATCCAGGAGCTTCTGAATGTTGCTAAGCAACACATTCCT
TATGATTTCTGGAAGGCTACCCCTCTGGTTCTCAAGGCCACAGCTGGTTTGCGCCTGCTGCCAGGAGAAA
AGGCTCAGAAGTTGCTGCAAAAGGTGAAGGAGGTGTTCAAGGCATCACCCTTCCTTGTCGGGGATGACTG
TGTTTCCATCATGAACGGCACAGACGAAGGTGTTTCGGCCTGGATCACTGTCAACTTCCTGACAGGCAGT
CTGAAGACCCCAGGAAGCAGCAGTGTGGGCATGCTGGATTTGGGCGGAGGATCCACTCAGATCACTTTCC
TCCCACGTGTCGAGGGTACCCTGCAGGCCTCCCCGCCCGGCCACCTGACGGCGCTGCAGATGTTTAACAG
GACTTACAAGCTGTACTCCTACAGCTACCTGGGGCTGGGACTGATGTCGGCACGGCTGGCTATCTTGGGC
GGTGTGGAGGGGAAACCTGCTGAGAATGACAAGGAACTGGTCAGCCCCTGTCTGTCTCCCCGGTTCCGAG
GAGAGTGGGAGCATGCGGAGGTCACCTATAGAATTTCAGGACAGAAGGCAGTGGGCCTCTATGAGCTGTG
TGCCAGTAGAGTATCAGAAGTCCTCCGAAATAAAGTACACAGGACGGAAGAGGCACAGCACGTGGACTTC
TATGCGTTTTCCTACTACTATGACCTTGCAGCCAGCTTTGGTCTTATAGATGCAGAGAAAGGAGGCAGCC
TTGTAGTTGGAGACTTTGAGATAGCAGCCAAGTACGTGTGCCGCACTCTGGAGACACAGCCGCCGAGCAG
CCCCTTTGCCTGCATGGACCTCACCTACATCAGCCTACTGCTCCACGAGTTTGGTTTTCCCGGGGACAAG
GTGCTGAAGCTGGCTCGGAAAATTGACAATGTTGAAACCAGCTGGGCTCTGGGAGCTATTTTTCATTACA
TCGACTCCCTGAAGAGACAGAAGGTTCCTGCCTTGTAG

Translation (455 aa):
MRKIPNHGTLRMTKVAYPLGLCVGLFIYVAYIKWHRASAAQAFFTIAGAASGARWTQQAFSSPGSAARGH
EVFYGIMFDAGSTGTRIHVFQFARPPGETPTLTHETFKALKPGLSAYADDVEKSAQGIQELLNVAKQHIP
YDFWKATPLVLKATAGLRLLPGEKAQKLLQKVKEVFKASPFLVGDDCVSIMNGTDEGVSAWITVNFLTGS
LKTPGSSSVGMLDLGGGSTQITFLPRVEGTLQASPPGHLTALQMFNRTYKLYSYSYLGLGLMSARLAILG
GVEGKPAENDKELVSPCLSPRFRGEWEHAEVTYRISGQKAVGLYELCASRVSEVLRNKVHRTEEAQHVDF
YAFSYYYDLAASFGLIDAEKGGSLVVGDFEIAAKYVCRTLETQPPSSPFACMDLTYISLLLHEFGFPGDK
VLKLARKIDNVETSWALGAIFHYIDSLKRQKVPAL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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