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Genome Displays Related Resources Gene HomoloGene MANE RefSeq
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Report for CCDS19169.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
19169.1 |
Public |
Mus musculus |
5 |
Slc5a6 |
23 |
108 |
98 |
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Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 19169.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000080431.7 |
ENSMUSP00000079291.1 |
Accepted |
alive |
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EBI |
ENSMUST00000114668.6 |
ENSMUSP00000110316.1 |
Accepted |
alive |
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EBI |
ENSMUST00000202520.3 |
ENSMUSP00000143938.1 |
Accepted |
alive |
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EBI |
ENSMUST00000202556.3 |
ENSMUSP00000143993.1 |
Accepted |
alive |
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NCBI |
NM_001177621.1 |
NP_001171092.1 |
Accepted |
alive |
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NCBI |
NM_001177622.1 |
NP_001171093.1 |
Accepted |
alive |
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NCBI |
NM_001360022.1 |
NP_001346951.1 |
Accepted |
alive |
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NCBI |
NM_177870.5 |
NP_808538.1 |
Accepted |
alive |
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Chromosomal Locations for CCDS 19169.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1905 nt): ATGAGTGTGGCGAGCACTGCAGCTCCCTTCCATACAACCTCAGGCTCCAGCGGGGCTATTTCTACCTTTT CTGTTGTGGACTATGTGGTATTTGGCCTGTTGCTGGTCCTCTCCCTTGTCATTGGGCTCTATCATGCTTG TCGTGGCTGGGGCCACCATACCGTTGGTGAACTGCTGATGGCAGACCGCAAAATGGGCTGTCTTCCTGTG GCACTGTCCTTGCTGGCCACCTTCCAGTCAGCCGTGGCCATCCTGGGAGCACCAGCTGAGATCTTCCGAT TTGGAACCCAGTATTGGTTCCTGGGGTGCTCCTACTTCCTGGGGCTCCTGATCCCTGCTCACATCTTCAT CCCTGTCTTCTACCGTCTGCATCTGACCAGCGCCTATGAGTACCTAGAGCTCCGCTTCAATAAAGCAGTT CGGATCTGTGGGACTGTGACCTTCATCTTTCAGATGGTGATATACATGGGAGTTGCTCTCTATGCACCAT CCTTGGCCCTCAATGCAGTGACTGGATTTGATTTATGGCTGTCAGTGCTGGCCCTAGGAATTGTCTGCAA CATCTACACTGCACTGGGTGGGCTGAAGGCTGTCATCTGGACAGATGTGTTCCAAACACTGGTCATGTTC CTCGGGCAGCTGGTAGTGATCATTGTAGGAGCAGCCAGAGTGGGTGGCTTGGGCCATGTATGGAATGTGA CTTCCCAGCATGGCCTCATCTCTGGGATTAACCTGGATCCTGACCCCTTTGTGCGTCATACTTTCTGGAC TTTGGCCTTTGGAGGTGTCTTCATGATGCTCTCCTTGTATGGAGTGAATCAGGCTCAGGTGCAGCGCTAC CTCAGTTCCCACTCGGAGAGAGCTGCTGTGCTCTCCTGCTATGCAGTGTTCCCTTGCCAGCAAGTGGCCC TCTGCATGAGCTGCCTCATTGGTCTGGTCATGTTTGCCTATTATAACATGTATAGCATGAGCCCCGAGCT GAAGCAAGCAGCCCCTGACCAGTTAGTCCTCTATTTTGTGATGGACCTCCTGAAAGACATGCCAGGGCTG CCTGGGCTCTTCGTTGCCTGTCTCTTCAGTGGATCTCTCAGCACCATATCCTCTGCATTCAATTCACTGG CAACTGTCACGATGGAAGACCTGATCCAGCCCTGGTTCCCACAGTTGACTGAAACTCGGGCCATCATGCT TTCTCGAGGCCTTGCCTTTGCCTATGGGCTAGTTTGCCTGGGAATGGCCTATATTTCCTCTCATCTGGGA TCAGTGCTCCAGGCAGCACTCAGTATCTTTGGCATGGTTGGAGGGCCACTGCTGGGACTCTTCTGCCTTG GACTGTTCTTCCCATGCGCCAACCCTCTTGGTGCCATTGTAGGCCTGTTGACGGGACTCACCATGGCCTT CTGGATCGGCATTGGGAGCATAGTAAGCAGGATGAGTTCTGCTGTGGCACCCCCTCCCCTTAATGGATCC AGCTCCTTCCTGCCTGCCAATGTAACTGTCGCCGCTGTGACCACCGTGATGCCTTCTACCCTGTCCAAGC CCACAGGACTGCAGCACTTCTATTCCCTGTCCTATTTATGGTACAGCGCGCACAACTCCACCACAGTCAT TGTAGTGGGCCTGATTGTCAGTCTGCTCACTGGGGGAATGCGGGGCCGGTCCCTGAACCCCGGCACCATT TACCCTGTGCTGCCAAAGCTCCTAGCACTCCTGCCCCTATCCTGCCAGAAGCGGCTTTGCTGGAGAAGCC ACAGCCAGGATATCCCTGTGATCCCCAACCTGTTTCCAGAGAAGATGAGGAATGGGGTGCTGCAGGACAG CACAGACAAAGAGAGGATGGCTGAAGATGGCCTCGTCCACCAGCCGTGCAGCCCTACCTACGTTGTCCAG GAGACCTCCCTGTGA
Translation (634 aa): MSVASTAAPFHTTSGSSGAISTFSVVDYVVFGLLLVLSLVIGLYHACRGWGHHTVGELLMADRKMGCLPV ALSLLATFQSAVAILGAPAEIFRFGTQYWFLGCSYFLGLLIPAHIFIPVFYRLHLTSAYEYLELRFNKAV RICGTVTFIFQMVIYMGVALYAPSLALNAVTGFDLWLSVLALGIVCNIYTALGGLKAVIWTDVFQTLVMF LGQLVVIIVGAARVGGLGHVWNVTSQHGLISGINLDPDPFVRHTFWTLAFGGVFMMLSLYGVNQAQVQRY LSSHSERAAVLSCYAVFPCQQVALCMSCLIGLVMFAYYNMYSMSPELKQAAPDQLVLYFVMDLLKDMPGL PGLFVACLFSGSLSTISSAFNSLATVTMEDLIQPWFPQLTETRAIMLSRGLAFAYGLVCLGMAYISSHLG SVLQAALSIFGMVGGPLLGLFCLGLFFPCANPLGAIVGLLTGLTMAFWIGIGSIVSRMSSAVAPPPLNGS SSFLPANVTVAAVTTVMPSTLSKPTGLQHFYSLSYLWYSAHNSTTVIVVGLIVSLLTGGMRGRSLNPGTI YPVLPKLLALLPLSCQKRLCWRSHSQDIPVIPNLFPEKMRNGVLQDSTDKERMAEDGLVHQPCSPTYVVQ ETSL
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