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Report for CCDS21497.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21497.1 Public Mus musculus 7 Ucp3 23 108 98 CCDS HistoryNCBI Gene:22229Re-query CCDS DB by CCDS ID:21497.1Re-query CCDS DB by GeneID:22229See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21497.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000032958.13 ENSMUSP00000032958.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000032958.13Link to Ensembl Protein Viewer:ENSMUSP00000032958.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000032958Re-query CCDS DB by Protein ID:ENSMUSP00000032958
Original member Current member EBI ENSMUST00000107059.1 ENSMUSP00000102674.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000107059.1Link to Ensembl Protein Viewer:ENSMUSP00000102674.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000107059Re-query CCDS DB by Protein ID:ENSMUSP00000102674
Original member Current member NCBI NM_009464.3 NP_033490.1 Accepted alive Link to Nucleotide Sequence:NM_009464.3Link to Protein Sequence:NP_033490.1Re-query CCDS DB by Nucleotide ID:NM_009464Re-query CCDS DB by Protein ID:NP_033490Link to BLAST:NP_033490.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_033490.1 308 P56501 308 100% 0 0

Chromosomal Locations for CCDS 21497.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 100479467 100479592 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100480086 100480287 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100480481 100480681 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100481871 100481972 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100482575 100482755 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100484994 100485108 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (927 nt):
ATGGTTGGACTTCAGCCCTCCGAAGTGCCTCCCACAACGGTTGTGAAGTTCCTGGGGGCCGGCACTGCGG
CCTGTTTTGCGGACCTCCTCACTTTTCCCCTGGACACCGCCAAGGTCCGTCTGCAGATCCAAGGGGAGAA
CCCAGGGGCTCAGAGCGTGCAGTACCGCGGTGTGCTGGGTACCATCCTGACTATGGTGCGCACAGAGGGT
CCCCGCAGCCCCTACAGCGGACTGGTCGCTGGCCTGCACCGCCAGATGAGTTTTGCCTCCATTCGAATTG
GCCTCTACGACTCTGTCAAGCAGTTCTACACCCCCAAGGGAGCGGACCACTCCAGCGTCGCCATCAGGAT
TCTGGCAGGCTGCACGACAGGAGCCATGGCAGTGACCTGCGCCCAGCCCACGGATGTGGTGAAGGTCCGA
TTTCAAGCCATGATACGCCTGGGAACTGGAGGAGAGAGGAAATACAGAGGGACTATGGATGCCTACAGAA
CCATCGCCAGGGAGGAAGGAGTCAGGGGCCTGTGGAAAGGGACTTGGCCCAACATCACAAGAAATGCCAT
TGTCAACTGTGCTGAGATGGTGACCTACGACATCATCAAGGAGAAGTTGCTGGAGTCTCACCTGTTTACT
GACAACTTCCCCTGTCACTTTGTCTCTGCCTTTGGAGCTGGCTTCTGTGCCACAGTGGTGGCCTCCCCGG
TGGATGTGGTAAAGACCCGATACATGAACGCTCCCCTAGGCAGGTACCGCAGCCCTCTGCACTGTATGCT
GAAGATGGTGGCTCAGGAGGGACCCACGGCCTTCTACAAAGGATTTGTGCCCTCCTTTCTGCGTCTGGGA
GCTTGGAACGTGATGATGTTTGTAACATATGAGCAACTGAAGAGGGCCTTAATGAAAGTCCAGGTACTGC
GGGAATCTCCGTTTTGA

Translation (308 aa):
MVGLQPSEVPPTTVVKFLGAGTAACFADLLTFPLDTAKVRLQIQGENPGAQSVQYRGVLGTILTMVRTEG
PRSPYSGLVAGLHRQMSFASIRIGLYDSVKQFYTPKGADHSSVAIRILAGCTTGAMAVTCAQPTDVVKVR
FQAMIRLGTGGERKYRGTMDAYRTIAREEGVRGLWKGTWPNITRNAIVNCAEMVTYDIIKEKLLESHLFT
DNFPCHFVSAFGAGFCATVVASPVDVVKTRYMNAPLGRYRSPLHCMLKMVAQEGPTAFYKGFVPSFLRLG
AWNVMMFVTYEQLKRALMKVQVLRESPF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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