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Report for CCDS22048.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22048.1 Public Mus musculus 7 Dhcr7 23 108 98 CCDS HistoryNCBI Gene:13360Re-query CCDS DB by CCDS ID:22048.1Re-query CCDS DB by GeneID:13360See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22048.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000073878.11 ENSMUSP00000073541.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000073878.11Link to Ensembl Protein Viewer:ENSMUSP00000073541.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000073878Re-query CCDS DB by Protein ID:ENSMUSP00000073541
Original member Current member EBI ENSMUST00000124340.7 ENSMUSP00000117659.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000124340.7Link to Ensembl Protein Viewer:ENSMUSP00000117659.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000124340Re-query CCDS DB by Protein ID:ENSMUSP00000117659
Original member Current member EBI ENSMUST00000141916.7 ENSMUSP00000121782.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000141916.7Link to Ensembl Protein Viewer:ENSMUSP00000121782.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000141916Re-query CCDS DB by Protein ID:ENSMUSP00000121782
Original member Current member NCBI NM_007856.2 NP_031882.1 Accepted alive Link to Nucleotide Sequence:NM_007856.2Link to Protein Sequence:NP_031882.1Re-query CCDS DB by Nucleotide ID:NM_007856Re-query CCDS DB by Protein ID:NP_031882Link to BLAST:NP_031882.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_031882.1 471 O88455 471 100% 0 0

Chromosomal Locations for CCDS 22048.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 143836644 143836729 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 143837762 143837984 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 143840433 143840523 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 143841158 143841371 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 143843114 143843318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 143845441 143845572 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 143847053 143847517 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1416 nt):
ATGGCTTCGAAATCCCAGCACAACGCTCCCAAAGTCAAGAGTCCCAACGGCAAGGCTGGATCTCAAGGAC
AATGGGGCCGTGCCTGGGAAGTGGACTGGTTCTCCCTGGCCAGCATCATTTTCCTGCTGCTCTTCGCTCC
ATTCATTGTGTACTACTTCATCATGGCATGTGACCAGTACAGCTGCTCCCTGACTGCCCCCGCATTGGAT
ATAGCTACAGGCCATGCTAGTCTGGCAGACATTTGGGCCAAGACACCACCTGTGACAGCTAAAGCTGCCC
AACTGTATGCCTTGTGGGTCAGCTTCCAGGTGCTGCTTTATTCCTGGCTTCCTGACTTCTGCCACAGATT
TCTGCCAGGTTATGTGGGAGGCGTCCAAGAAGGTGCCATTACTCCAGCAGGGGTTGTAAACAAGTATGAG
GTGAATGGGCTGCAAGCCTGGCTCATTACCCACATCCTCTGGTTTGTGAACGCTTACCTCTTATCCTGGT
TCTCCCCCACCATCATCTTTGACAACTGGATCCCCTTGCTATGGTGTGCCAACATCCTGGGCTATGCCGT
GTCCACGTTCGCAATGATCAAGGGCTACCTGTTCCCCACCAGTGCCGAAGACTGCAAATTCACAGGCAAT
TTCTTCTACAACTATATGATGGGAATTGAGTTCAACCCCCGCATCGGGAAGTGGTTTGACTTCAAGCTGT
TCTTCAATGGACGACCAGGGATTGTAGCCTGGACCCTCATTAACCTGTCCTTCGCTGCCAAGCAGCAGGA
GCTTTATGGCCATGTGACCAACTCCATGATTTTGGTCAATGTCTTGCAGGCCATCTACGTGTTAGACTTC
TTCTGGAATGAAACCTGGTATCTGAAGACCATCGACATCTGCCATGACCACTTTGGGTGGTACCTAGGCT
GGGGAGATTGTGTGTGGCTGCCCTACCTCTACACACTGCAGGGCCTGTACTTGGTGTACCACCCTGTGCA
GCTCTCCACCCCCAATGCCTTGGGCATCCTGCTGCTTGGCCTCGTGGGTTACTATATCTTCCGAATGACC
AACCATCAGAAGGACCTGTTCCGCAGGACAGATGGGCGCTGCCTCATCTGGGGCAAGAAGCCCAAGGCCA
TTGAGTGCTCCTACACATCAGCTGATGGGCTGAAGCACCACAGCAAGCTGTTGGTCTCAGGCTTCTGGGG
TGTGGCCCGCCACTTCAACTATACTGGTGACCTGATGGGCAGCCTTGCCTACTGCCTGGCTTGTGGCGGT
GGCCACCTCCTCCCCTACTTTTACATCATCTATATGACTATCCTGCTCACCCACCGCTGCCTCCGTGATG
AACACCGCTGTGCCAACAAGTATGGCCGTGATTGGGAGCGCTACACAGCCGCTGTGCCCTACCGCCTGCT
GCCTGGAATCTTCTGA

Translation (471 aa):
MASKSQHNAPKVKSPNGKAGSQGQWGRAWEVDWFSLASIIFLLLFAPFIVYYFIMACDQYSCSLTAPALD
IATGHASLADIWAKTPPVTAKAAQLYALWVSFQVLLYSWLPDFCHRFLPGYVGGVQEGAITPAGVVNKYE
VNGLQAWLITHILWFVNAYLLSWFSPTIIFDNWIPLLWCANILGYAVSTFAMIKGYLFPTSAEDCKFTGN
FFYNYMMGIEFNPRIGKWFDFKLFFNGRPGIVAWTLINLSFAAKQQELYGHVTNSMILVNVLQAIYVLDF
FWNETWYLKTIDICHDHFGWYLGWGDCVWLPYLYTLQGLYLVYHPVQLSTPNALGILLLGLVGYYIFRMT
NHQKDLFRRTDGRCLIWGKKPKAIECSYTSADGLKHHSKLLVSGFWGVARHFNYTGDLMGSLAYCLACGG
GHLLPYFYIIYMTILLTHRCLRDEHRCANKYGRDWERYTAAVPYRLLPGIF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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