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Report for CCDS22494.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22494.1 Public Mus musculus 8 Man2b1 23 108 98 CCDS HistoryNCBI Gene:17159Re-query CCDS DB by CCDS ID:22494.1Re-query CCDS DB by GeneID:17159See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22494.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000034121.10 ENSMUSP00000034121.9 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000034121.10Link to Ensembl Protein Viewer:ENSMUSP00000034121.9Re-query CCDS DB by Nucleotide ID:ENSMUST00000034121Re-query CCDS DB by Protein ID:ENSMUSP00000034121
Original member NCBI NM_010764.2 NP_034894.2 Updated not alive Link to Nucleotide Sequence:NM_010764.2Link to Protein Sequence:NP_034894.2Re-query CCDS DB by Nucleotide ID:NM_010764Re-query CCDS DB by Protein ID:NP_034894
Current member NCBI NM_010764.3 NP_034894.2 Accepted alive Link to Nucleotide Sequence:NM_010764.3Link to Protein Sequence:NP_034894.2Re-query CCDS DB by Nucleotide ID:NM_010764Re-query CCDS DB by Protein ID:NP_034894Link to BLAST:NP_034894.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_034894.2 1013 O09159 1013 100% 0 0

Chromosomal Locations for CCDS 22494.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 85083330 85083488 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 85084401 85084503 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 85084641 85084814 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 85085355 85085548 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 85086811 85086943 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 85087172 85087317 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 85088554 85088670 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 85090918 85091000 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 85091084 85091204 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 85091273 85091351 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 85091511 85091620 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 85091838 85091945 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 85092065 85092181 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 85092832 85093020 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 85093919 85094016 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 85094106 85094223 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 85095120 85095238 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 85095326 85095427 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 85095539 85095626 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 85095731 85095811 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 85096271 85096498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 85096706 85096861 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 85096952 85097054 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 85097402 85097517 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3042 nt):
ATGGGCACCGGACCGCTCACCTCTGGTGTCCGTGCTGGTGGCGGGAACACCGGGTGGCTCTGGATGAGCT
CCTGCAACCTAGGTTCGCCAGTCCTGCCTATTTCCTTTCTTTTTTGGCTGTTGCTGGCCGCGCCTGGCGC
TCGGGCCGCGGGTTACAAGACATGTCCCCCAACGAAGCCAGGCATGCTCAATGTGCACCTGCTGCCTCAT
ACACACGATGATGTAGGCTGGCTGAAGACAGTGGACCAATACTATTACGGCATCCTGAGTGATGTTCAGC
ACGCATCTGTTCAGTACATCCTAGACTCAGTAGTCTCCTCTCTACTGGAGAAACCCACCCGTCGCTTCAT
CTATGTGGAAATGGCTTTCTTCTCCCGTTGGTGGAAGCAGCAGACCAGTGCAACCCAGGACGCTGTACGG
AACCTGGTGCGCCAGGGGCGCCTGGAGTTTGTCAATGGTGGCTGGGTGATGAACGACGAAGCAGCCACCC
ACTATGGCGCGATTGTGGACCAGATGACACTTGGGCTACGCTTCCTGCAAGACACATTTGGTAGTGATGG
ACTTCCCCGTGTGGCCTGGCATATTGACCCTTTCGGCCACTCTCGAGAACAGGCCTCCCTGTTTGCCCAG
ATGGGTTTTGATGGCTTCTTCCTTGGGCGCATTGACTATCAAGATAAACTTAATCGGAAGAAAAAGCTGA
GGATGGAGGAGCTGTGGAGAGCTAGTGACAGCTTGGAGCCCCCCGCTGCTGACCTCTTTACTGGTGTGCT
CCCCAATAATTACAACCCCCCGAAATACCTGTGCTGGGATGTGCTATGTACAGACCCTCCCGTGGTGGAT
AATCCCCGGAGCCCTGAGTTCAATGCAAAAACGTTGGTCAACTACTTCCTGAAGCTCGCTTCTTCCCAGA
AAGGGTTTTACCGAACCAACCACACCGTGATGACCATGGGCTCAGACTTCCATTATGAGAATGCCAACAT
GTGGTTCAAAAACATGGACAAGCTGATCCGCCTGGTCAACGCGCAGCAGGTAAACGGGAGCCTCGTCCAC
GTTCTCTACTCCACCCCTACGTGTTACCTCTGGGAGCTGAACAAGGCCAATCTCACCTGGACAGTGAAGG
AGGACGACTTCTTTCCTTATGCCGATGGCCCCCACATGTTCTGGACTGGCTATTTTTCCAGCAGGCCAGC
CCTCAAGCGCTATGAGCGCCTCAGTTACAACTTCCTGCAGGTGTGTAACCAGCTGGAAGCACTGGTGGGT
CCCGAAGCCAACGTGGGACCCTATGGCTCGGGAGACAGCGCACCTCTTCAGGAGGCAATGGCGGTGCTCC
AACACCACGACGCTGTCAGTGGTACTGCAAGGCAGAATGTTGTAAATGACTACGCGAGGCAGCTGGCAGC
AGGCTGGGGACCCTGTGAGGTTCTCGTGAGCAACGCTCTGGCGCGACTCAGCCATTACAAACAGAACTTC
TCATTCTGTCGTGAGCTCAACATTAGCATCTGCCCAGTCAGCCAGACTTCGGAGCGTTTCCAGGTAACTC
TTTACAACCCCCTGGGGCGAAAGGTGGATCAGATGGTTCGGCTGCCTGTCTATGAAGGCAACTTCATTGT
GAAGGACCCTCATGATAAGAACATTTCCAGTAACGTGGTGATGGTTCCTAGCTATTACAGTGAGACTTAC
CAATGGGAGCTGCTGTTCCCAGCCTCAGTGCCTGCCCTGGGCTTCAGCACCTACTCTGTGGCCAAAATGA
GTGACCTTAACCACCAAGCCCACAACCTGCTGTCCAGGCCCAGGAAACACAAGTCCCATCATGTCTTAGT
CATTGAAAATAAGTACATGCGGGCCACATTTGACTCTGGCACGGGGTTATTGATGAAGATTGAAAACTTG
GAACAGAACCTCTCGCTCCCTGTGAGCCAAGGCTTCTTTTGGTATAATGCCAGTGTTGGTGATGAGGAGA
GTTCTCAGGCCTCTGGGGCCTACATCTTCAGACCCAATGTCGGTAAACCGATACCTGTGAGCCGCTGGGC
TCAGATCAGTTTGGTGAAGACAGCCTTGGTGCAGGAGGTACACCAGAATTTTTCAGCCTGGTGTTCCCAA
GTGATTCGCCTGTACAAAGGACAGCGCCATTTGGAGCTGGAGTGGACGGTGGGACCAATCCCAGTGAGAG
ATGACTGGGGGAAGGAAGTCATCAGCCGCTTTGACACCCCAATGAAAACCAAGGGACAGTTCTTCACGGA
CAGCAACGGCCGGGAAATCCTGAAGAGGAGGGATGATTATCGACCCACCTGGACATTGAATCAGACTGAG
CCGGTGGCTGGAAATTACTATCCTGTCAACACTCGAATTTATATCACGGATGGGCAAATGCAGCTGACCG
TGTTGACCGACCGCTCCCAGGGGGGCAGCAGTCTGCAGGATGGCTCGTTGGAGCTCATGGTGCACCGTCG
GCTGTTGGTAGATGATGATCGTGGAGTGTCGGAACCCTTGTTGGAGACAGATACCGGGGATAAGGTTCGA
GGACGCCACCTTGTGCTTTTGAGTTCTGTCAGTGATGCCGCTGCAAGACACCGACTGCTGGCGGAACAAG
AAGTCCTGGCCCCTCAGGTGGTGCTGTCTCTGGGTGGTAGCAGTCCCTATCACTCCCGGGCGACACCAAA
AACGCAGTTTTCCGGACTTCGCCAGGAGCTACCTCCTCAGGTGCATTTGCTCACACTGGCCCGCTGGGGG
CCAAAGATGCTGCTGCTGCGCTTGGAGCACCAGTTCGCTCTGAAAGAAGATTCGGATCGCAACCTGAGCT
CCCCTGTAACCTTGAACGTTCAGAACCTGTTCCAGACCTTCACTATCAACTACCTGCAGGAGACCACACT
GGCAGCCAACCAGCCCCTGTCCAGGGCTTCCAGGCTCAAGTGGATGACAAATACTGGTCCCACCTCCTAC
CCTGAGCCTTCCAAGTTGGACCCTACCTCAGTCACACTGAAGCCTATGGAAATACGTACCTTCCTGGCCT
CTGTACAATGGCAAGAACACAGGCCTGCCTGA

Translation (1013 aa):
MGTGPLTSGVRAGGGNTGWLWMSSCNLGSPVLPISFLFWLLLAAPGARAAGYKTCPPTKPGMLNVHLLPH
THDDVGWLKTVDQYYYGILSDVQHASVQYILDSVVSSLLEKPTRRFIYVEMAFFSRWWKQQTSATQDAVR
NLVRQGRLEFVNGGWVMNDEAATHYGAIVDQMTLGLRFLQDTFGSDGLPRVAWHIDPFGHSREQASLFAQ
MGFDGFFLGRIDYQDKLNRKKKLRMEELWRASDSLEPPAADLFTGVLPNNYNPPKYLCWDVLCTDPPVVD
NPRSPEFNAKTLVNYFLKLASSQKGFYRTNHTVMTMGSDFHYENANMWFKNMDKLIRLVNAQQVNGSLVH
VLYSTPTCYLWELNKANLTWTVKEDDFFPYADGPHMFWTGYFSSRPALKRYERLSYNFLQVCNQLEALVG
PEANVGPYGSGDSAPLQEAMAVLQHHDAVSGTARQNVVNDYARQLAAGWGPCEVLVSNALARLSHYKQNF
SFCRELNISICPVSQTSERFQVTLYNPLGRKVDQMVRLPVYEGNFIVKDPHDKNISSNVVMVPSYYSETY
QWELLFPASVPALGFSTYSVAKMSDLNHQAHNLLSRPRKHKSHHVLVIENKYMRATFDSGTGLLMKIENL
EQNLSLPVSQGFFWYNASVGDEESSQASGAYIFRPNVGKPIPVSRWAQISLVKTALVQEVHQNFSAWCSQ
VIRLYKGQRHLELEWTVGPIPVRDDWGKEVISRFDTPMKTKGQFFTDSNGREILKRRDDYRPTWTLNQTE
PVAGNYYPVNTRIYITDGQMQLTVLTDRSQGGSSLQDGSLELMVHRRLLVDDDRGVSEPLLETDTGDKVR
GRHLVLLSSVSDAAARHRLLAEQEVLAPQVVLSLGGSSPYHSRATPKTQFSGLRQELPPQVHLLTLARWG
PKMLLLRLEHQFALKEDSDRNLSSPVTLNVQNLFQTFTINYLQETTLAANQPLSRASRLKWMTNTGPTSY
PEPSKLDPTSVTLKPMEIRTFLASVQWQEHRPA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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