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Report for CCDS22666.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22666.1 Public Mus musculus 8 Fcsk 23 108 98 CCDS HistoryNCBI Gene:234730Re-query CCDS DB by CCDS ID:22666.1Re-query CCDS DB by GeneID:234730See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22666.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000041382.6 ENSMUSP00000039271.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000041382.6Link to Ensembl Protein Viewer:ENSMUSP00000039271.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000041382Re-query CCDS DB by Protein ID:ENSMUSP00000039271
Original member Current member NCBI NM_172283.3 NP_758487.2 Accepted alive Link to Nucleotide Sequence:NM_172283.3Link to Protein Sequence:NP_758487.2Re-query CCDS DB by Nucleotide ID:NM_172283Re-query CCDS DB by Protein ID:NP_758487Link to BLAST:NP_758487.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_758487.2 1090 Q7TMC8-1 1090 100% 0 0

Chromosomal Locations for CCDS 22666.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 110882967 110883086 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 110883228 110883451 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 110883841 110883940 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 110884031 110884218 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 110886293 110886412 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 110886543 110886686 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 110887051 110887272 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 110887355 110887521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 110887668 110887878 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 110888919 110889289 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 110889676 110889740 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 110890176 110890346 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 110890468 110890569 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 110892057 110892169 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 110893289 110893460 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 110893639 110893758 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 110894266 110894346 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 110894729 110894826 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 110895270 110895342 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 110895884 110896009 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 110899199 110899249 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 110899395 110899546 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 110899833 110899914 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3273 nt):
ATGGAGCAGTCAGAGGGAGTCAATTGGACTGTCATTATCCTGACATGCCAGTACAAGGACAGTGTCCAGG
TCTTTCAGAGAGAGCTGGAGGTAAGGCAGAGACGGGAGCAGATTCCTGCGGGGACGATGTTACTGGCTGT
GGAGGATCCCCAGACTCGAGTCGGCAGCGGAGGAGCCACCCTCAACGCACTGCTGGTGGCTGCTGAACAC
TTGAGTGCCCGAGCTGGCTTCACTGTGGTCACGTCCGATGTCCTGCACTCTGCCTGGATCCTCATCTTGC
ACATGGGCCGAGACTTCCCCTTCGATGACTGTGGCAGGGCCTTCACTTGCCTCCCTGTGGAGAACCCACA
GGCCCCTGTGGAGGCCTTGGTATGCAACCTGGACTGCCTGTTGGATATCATGACCCACCGGCTGGGTCCA
GGTTCCCCACCAGGTGTGTGGGTCTGCAGCACCGACATGCTTCTGTCTGTTCCTCCAAACCCTGGGATCA
GTTGGGATGGCTTCCGGGGAGCCAGAGTGATCGCCTTTCCTGGGAGCCTGGCCTATGCGTTGAACCACGG
TGTCTACCTCACTGACTCACAGGGCTTGGTTTTGGACATTTACTACCAGGGCACTAAGGCGGAGATACAA
CGTTGTGTCGGACCTGATGGGCTGGTACCATTGGTCTCCGGGGTCGTCTTCTTCTCTGTGGAGACTGCTG
AGCACCTCCTAGCCACCCATGTGAGCCCACCGCTGGATGCCTGCACCTATATGGGCTTGGACTCTGGAGC
CCAGCCTGTGCAGCTGTCTCTGTTTTTCGACATCCTGCTCTGCATGGCTCGGAATATGAGCAGGGAGAAC
TTCCTGGCTGGGCGGCCCCCGGAGTTGGGGCAAGGTGACATGGATGTAGCAAGTTACCTGAAGGGAGCCC
GGGCCCAGCTGTGGAGGGAGCTTCGAGATCAGCCCCTCACAATGGTGTATGTCCCTGACGGCGGCTACAG
CTACATGACGACTGATGCCACCGAGTTCCTGCACAGACTCACGATGCCTGGAGTAGCTGTGGCACAGATT
GTTCACTCCCAGGTGGAGGAGCCACAGCTGCTAGAGGCTACGTGCTCGGTGGTCAGCTGCCTGCTCGAGG
GCCCTGTGCACCTGGGGCCTCGAAGTGTCCTGCAGCACTGTCACCTGAGGGGCCCCATTCGCATCGGCGC
TGGCTGCTTTGTGAGTGGTCTGGATACAGCCCACTCGGAGGCACTGCATGGCCTGGAGCTCCATGATGTC
ATCCTGCAGGGACACCATGTGCGGCTGCATGGCTCCCTGAGCCGTGTATTTACTCTTGCTGGCCGTCTGG
ACAGCTGGGAAAGACAGGGGGCAGGCATGTATCTCAACATGTCCTGGAATGAGTTCTTCAAGAAGACAGG
CATTCGAGACTGGGACCTGTGGGACCCAGATACACCCCCCTCAGATCGATGCCTCCTCACTGCCCGCCTT
TTCCCTGTGCTCCACCCCACGAGGGCCCTGGGGCCCCAGGATGTGCTGTGGATGCTGCACCCCCGCAAAC
ACAGAGGTGAGGCCCTTCGGGCCTGGCGAGCCTCCTGGCGTCTGTCCTGGGAGCAGCTGCAACCTTGTGT
GGACCGGGCTGCCACACTGGACTTCCGCCGAGATCTGTTCTTCTGCCAGGCCTTGCAGAAGGCAAGGCAT
GTGTTAGAGGCGCGGCAGGACCTCTGCCTACGTCCACTGATCCGGGCCGCTGTCGGGGAAGGTTGCTCTG
GGCCCCTGCTGGCCACACTTGACAAGGTTGCAGCTGGGGCAGAAGATCCTGGCGTGGCAGCCCGGGCTCT
GGCTTGTGTGGCCGATGTGCTGGGCTGCATGGCAGAGGGCCGAGGAGGCTTGCGCAGTGGGCCAGCTGCC
AACCCTGAGTGGATTCAGCCTTTCTCATACTTGGAGTGTGGAGACCTGATGAGGGGTGTGGAGGCGCTTG
CCCAGGAGAGAGAGAAGTGGCTGACCAGGCCTGCCTTGCTGGTTCGAGCTGCCCGCCATTACGAGGGGGC
CGAGCAGATCCTGATCCGCCAGGCTGTGATGACAGCCCGGCACTTCGTCTCCACCCAGCCCGTGGAGCTG
CCCGCACCCGGGCAGTGGGTGGTGACTGAGTGCCCAGCCCGTGTGGATTTCTCTGGGGGCTGGAGTGACA
CACCGCCCATTGCCTATGAGCTTGGTGGAGCAGTGTTGGGCCTGGCTGTGCGGGTGGATGGCCGCCGGCC
CATCGGGGCCAAAGCACGCCGCATCCCGGAGCCTGAGCTCTGGCTGGCAGTGGGACCTCGGCAGGATGAG
ATGACCATGAGGATAGTGTGCCGGAGCCTGGATGACCTGCGGGATTACTGCCAGCCTCATGCCCCAGGGG
CCTTGCTGAAGGCAGCCTTTATCTGTGCTGGCATTGTGCATCTCCACTCAGAGCTCCCTCTGCTTGAACA
GTTGTTACACTCCTTTAATGGTGGCTTTGAGCTGCACACGTGGTCAGAGCTGCCGCACGGCTCTGGTCTT
GGCACCAGCAGCATCCTGGCAGGGGCTGCCCTGGCTGCCTTACAGCGGGCTGCAGGCCGGGCAGTGGGCA
CGGAGGCTCTCATCCACGCAGTGCTGCACCTGGAGCAGGTGCTCACCACAGGAGGTGGCTGGCAGGACCA
AGTCAGTGGCCTAATGCCTGGCATCAAAGTGGGGCGCTCCCGGGCCCAGCTGCCCCTCAAGGTGGAGGTG
GAGGAAATCACTGTGCCTGAGGGCTTTGTCCAGAAGATCAATGACCATCTGCTCCTGGTTTATACCGGCA
AGACCCGATTGGCCCGGAATCTGCTGCAGGACGTGCTGAGGAACTGGTACGCTCGGTTGCCCGTTGTGGT
ACAGAATGCCCGCAGACTGGTGCGACAGACCGAGAAGTGCGCTGAAGCTTTCCGCCAAGGAAACCTGCCT
CTGCTGGGACAGTACCTGACCTCATACTGGGAGCAGAAGAAGCTTATGGCCCCAGGCTGCGAGCCGCTGG
CCGTGCAGCGAATGATGGATGTCCTGGCCCCGTATGCGTATGGCCAAAGCCTGGCAGGGGCAGGTGGTGG
GGGCTTTCTCTATCTATTGACCAAGGAACCCCGGCAGAAAGAGACTCTGGAAGCTGTCCTGGCCAAGGCT
GAGGGCCTTGGCAACTACAGTGTCCACCTGGTGGAAGTGGATCCTCAGGGCCTGAGCCTGCAGCTGCTGG
GACACGACACCCGTCTTTGTGGGGCCGGGCCCTCTGAAGTGGGCACCACCTAG

Translation (1090 aa):
MEQSEGVNWTVIILTCQYKDSVQVFQRELEVRQRREQIPAGTMLLAVEDPQTRVGSGGATLNALLVAAEH
LSARAGFTVVTSDVLHSAWILILHMGRDFPFDDCGRAFTCLPVENPQAPVEALVCNLDCLLDIMTHRLGP
GSPPGVWVCSTDMLLSVPPNPGISWDGFRGARVIAFPGSLAYALNHGVYLTDSQGLVLDIYYQGTKAEIQ
RCVGPDGLVPLVSGVVFFSVETAEHLLATHVSPPLDACTYMGLDSGAQPVQLSLFFDILLCMARNMSREN
FLAGRPPELGQGDMDVASYLKGARAQLWRELRDQPLTMVYVPDGGYSYMTTDATEFLHRLTMPGVAVAQI
VHSQVEEPQLLEATCSVVSCLLEGPVHLGPRSVLQHCHLRGPIRIGAGCFVSGLDTAHSEALHGLELHDV
ILQGHHVRLHGSLSRVFTLAGRLDSWERQGAGMYLNMSWNEFFKKTGIRDWDLWDPDTPPSDRCLLTARL
FPVLHPTRALGPQDVLWMLHPRKHRGEALRAWRASWRLSWEQLQPCVDRAATLDFRRDLFFCQALQKARH
VLEARQDLCLRPLIRAAVGEGCSGPLLATLDKVAAGAEDPGVAARALACVADVLGCMAEGRGGLRSGPAA
NPEWIQPFSYLECGDLMRGVEALAQEREKWLTRPALLVRAARHYEGAEQILIRQAVMTARHFVSTQPVEL
PAPGQWVVTECPARVDFSGGWSDTPPIAYELGGAVLGLAVRVDGRRPIGAKARRIPEPELWLAVGPRQDE
MTMRIVCRSLDDLRDYCQPHAPGALLKAAFICAGIVHLHSELPLLEQLLHSFNGGFELHTWSELPHGSGL
GTSSILAGAALAALQRAAGRAVGTEALIHAVLHLEQVLTTGGGWQDQVSGLMPGIKVGRSRAQLPLKVEV
EEITVPEGFVQKINDHLLLVYTGKTRLARNLLQDVLRNWYARLPVVVQNARRLVRQTEKCAEAFRQGNLP
LLGQYLTSYWEQKKLMAPGCEPLAVQRMMDVLAPYAYGQSLAGAGGGGFLYLLTKEPRQKETLEAVLAKA
EGLGNYSVHLVEVDPQGLSLQLLGHDTRLCGAGPSEVGTT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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