NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS23168.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23168.1 Public Mus musculus 9 Dlat 23 108 98 CCDS HistoryNCBI Gene:235339Re-query CCDS DB by CCDS ID:23168.1Re-query CCDS DB by GeneID:235339See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 23168.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000034567.3 ENSMUSP00000034567.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000034567.3Link to Ensembl Protein Viewer:ENSMUSP00000034567.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000034567Re-query CCDS DB by Protein ID:ENSMUSP00000034567
Original member Current member NCBI NM_145614.4 NP_663589.3 Accepted alive Link to Nucleotide Sequence:NM_145614.4Link to Protein Sequence:NP_663589.3Re-query CCDS DB by Nucleotide ID:NM_145614Re-query CCDS DB by Protein ID:NP_663589Link to BLAST:NP_663589.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_663589.3 642 Q8BMF4 642 100% 0 0

Chromosomal Locations for CCDS 23168.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 50636425 50636554 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 50637456 50637592 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 50637921 50638083 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 50640224 50640339 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 50644026 50644133 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 50644441 50644533 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 50645039 50645106 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 50649632 50649773 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 50650751 50650938 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 50653622 50653748 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 50657845 50657998 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 50658165 50658289 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 50658688 50658789 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 50659191 50659466 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1929 nt):
ATGTGGCGCGTCTGTGCGCGGAGGGCGCGGAGTGCTGTGCCCAGGGATGGGTTCAGGGCTCGGTGGGCGG
CCTTGAAGGAAGGCCCCGGGGCCCCATGCGGGAGCCCGCGGATTGGCCCCGCTGCGGTCCGTTGCGGTAG
TGGGATCCCCCGCTATGGGGTCCGCTCCTTGTGCGGCTGGAGCTCCGGCTCCGGCACTGTCCCGCGTAAC
CGCTTGCTGCGACAACTCCTGGGGTCGCCCAGCCGCCGCTCTTACAGCCTCCCTCCGCATCAGAAGGTTC
CATTACCTTCCCTTTCCCCTACAATGCAGGCAGGCACCATAGCCCGCTGGGAAAAAAAAGAAGGGGAAAA
AATCAGTGAGGGTGATCTAATTGCAGAGGTTGAAACTGATAAAGCCACTGTTGGGTTTGAGAGCCTGGAG
GAGTGCTATATGGCCAAGATCCTTGTTCCTGAAGGGACCAGAGATGTTCCAGTTGGGTCCATCATCTGTA
TCACAGTTGAAAAGCCTCAGGATATTGAGGCCTTTAAAAATTATACATTGGATTTGGCGGCGGCAGCTGC
CCCACAGGCAGCCCCAGCTGCAGCCCCAGCTCCAGCTGCTGCCCCAGCGGCACCTTCTGCAAGCGCTCCC
GGTAGCTCCTATCCTACTCATATGCAGATTGTTCTTCCTGCCCTCTCCCCAACCATGACCATGGGCACGG
TCCAGAGGTGGGAAAAGAAAGTGGGCGAGAAGCTGAGTGAAGGAGACTTGCTGGCAGAGATAGAGACCGA
CAAGGCCACCATAGGCTTTGAAGTACAAGAAGAAGGTTATCTGGCAAAAATCCTGGTCCCTGAAGGCACA
AGGGATGTTCCTCTGGGAGCTCCACTATGTATCATAGTAGAAAAACAGGAAGATATAGCAGCATTTGCAG
ACTACAGGCCAACAGAAGTGACCAGCTTAAAGCCACAGGCAGCACCACCTGCCCCACCCCCGGTGGCAGC
TGTTCCTCCCACTCCCCAGCCTGTAGCACCTACCCCCTCAGCTGCTCCTGCTGGACCAAAGGGAAGGGTG
TTCGTTAGTCCTCTTGCGAAGAAGTTGGCAGCAGAGAAAGGGATTGACCTCACCCAAGTTAAAGGGACGG
GACCAGAAGGCAGAATCATCAAGAAGGACATTGACTCTTTTGTGCCTTCTAAGGCTGCTCCTGCTGCAGC
AGCTGCCATGGCTCCCCCGGGTCCAAGAGTGGCACCAGCTCCTGCAGGTGTCTTCACAGACATCCCCATC
AGCAACATTCGTCGAGTGATTGCGCAGAGGCTCATGCAGTCGAAGCAGACTATACCTCATTATTACCTTT
CTGTCGATGTAAATATGGGAGAGGTGCTGTTGGTACGGAAGGAACTTAATAAGATGCTTGAAGGGAAAGG
GAAAATCTCCGTCAACGACTTCATTATAAAGGCTTCAGCTTTGGCCTGTCTGAAAGTTCCCGAAGCAAAC
TCGTCTTGGATGGACACAGTTATAAGGCAAAATCATGTGGTTGACGTCAGTGTTGCTGTCAGTACCCCTG
CAGGACTTATCACCCCTATTGTGTTTAATGCACACATAAAAGGACTGGAAACCATTGCTAGTGATGTTGT
TTCTTTAGCCTCCAAAGCGAGAGAGGGTAAACTTCAGCCTCATGAGTTCCAGGGTGGAACATTTACAATC
TCCAACTTAGGGATGTTTGGAATTAAGAATTTCTCTGCAATTATTAATCCACCTCAGGCATGTATTCTGG
CAATCGGTGCTTCAGAGGATAAACTGATCCCAGCAGATAATGAGAAAGGCTTTGATGTGGCTAGTGTGAT
GTCCGTTACACTCAGCTGTGATCATCGAGTTGTGGATGGAGCAGTTGGAGCCCAGTGGCTTGCTGAATTC
AAAAAGTACCTTGAAAAGCCTATAACTATGTTGTTATAA

Translation (642 aa):
MWRVCARRARSAVPRDGFRARWAALKEGPGAPCGSPRIGPAAVRCGSGIPRYGVRSLCGWSSGSGTVPRN
RLLRQLLGSPSRRSYSLPPHQKVPLPSLSPTMQAGTIARWEKKEGEKISEGDLIAEVETDKATVGFESLE
ECYMAKILVPEGTRDVPVGSIICITVEKPQDIEAFKNYTLDLAAAAAPQAAPAAAPAPAAAPAAPSASAP
GSSYPTHMQIVLPALSPTMTMGTVQRWEKKVGEKLSEGDLLAEIETDKATIGFEVQEEGYLAKILVPEGT
RDVPLGAPLCIIVEKQEDIAAFADYRPTEVTSLKPQAAPPAPPPVAAVPPTPQPVAPTPSAAPAGPKGRV
FVSPLAKKLAAEKGIDLTQVKGTGPEGRIIKKDIDSFVPSKAAPAAAAAMAPPGPRVAPAPAGVFTDIPI
SNIRRVIAQRLMQSKQTIPHYYLSVDVNMGEVLLVRKELNKMLEGKGKISVNDFIIKASALACLKVPEAN
SSWMDTVIRQNHVVDVSVAVSTPAGLITPIVFNAHIKGLETIASDVVSLASKAREGKLQPHEFQGGTFTI
SNLGMFGIKNFSAIINPPQACILAIGASEDKLIPADNEKGFDVASVMSVTLSCDHRVVDGAVGAQWLAEF
KKYLEKPITMLL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH