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Report for CCDS23432.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23432.1 Public Mus musculus 9 Pik3cb 23 108 98 CCDS HistoryNCBI Gene:74769Re-query CCDS DB by CCDS ID:23432.1Re-query CCDS DB by GeneID:74769See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 23432.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000035037.13 ENSMUSP00000035037.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000035037.13Link to Ensembl Protein Viewer:ENSMUSP00000035037.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000035037Re-query CCDS DB by Protein ID:ENSMUSP00000035037
Original member Current member NCBI NM_029094.3 NP_083370.2 Accepted alive Link to Nucleotide Sequence:NM_029094.3Link to Protein Sequence:NP_083370.2Re-query CCDS DB by Nucleotide ID:NM_029094Re-query CCDS DB by Protein ID:NP_083370Link to BLAST:NP_083370.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_083370.2 1064 Q8BTI9 1064 100% 0 0

Chromosomal Locations for CCDS 23432.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 99039713 99039850 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 99040921 99041053 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 99042524 99042669 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 99044745 99044868 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 99046547 99046714 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 99052305 99052383 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 99053971 99054080 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 99055342 99055520 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 99060185 99060284 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 99061731 99061874 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 99062837 99062958 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 99064020 99064208 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 99065560 99065610 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 99070241 99070371 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 99071348 99071444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 99073579 99073830 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 99088605 99088682 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 99090150 99090320 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 99093043 99093222 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 99094440 99094663 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 99101175 99101400 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 99105531 99105683 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3195 nt):
ATGCCTCCTGCTATGGCAGACAACCTTGACATCTGGGCAGTGGACTCACAGATTGCATCCGATGGCGCCA
TATCCGTCGATTTCCTTCTGCCCACCGGGATTTATATCCAGTTGGAAGTACCTCGGGAAGCTACCATTTC
TTATATTAAACAGATGTTATGGAAGCAAGTTCACAACTACCCGATGTTTAACCTCCTCATGGACATTGAC
TCGTATATGTTTGCATGTGTGAATCAAACTGCTGTATATGAGGAACTGGAAGACGAAACACGAAGACTTT
GTGATGTCAGACCTTTTCTTCCAGTTCTCAAACTAGTGACTAGAAGCTGTGACCCCGCAGAAAAATTGGA
CTCAAAAATTGGGGTTCTTATAGGAAAAGGTCTTCATGAGTTTGATGCCTTGAAGGATCCCGAAGTGAAT
GAATTTAGAAGAAAAATGCGCAAATTCAGTGAGGCCAAGATTCAGTCTCTGGTAGGGTTGTCTTGGATCG
ACTGGCTAAAGCACACGTATCCGCCTGAGCACGAGCCGTCCGTCCTGGAGAACTTGGAAGATAAACTTTA
TGGAGGAAAGCTGGTTGTGGCTGTGCACTTTGAAAATAGCCAGGATGTATTTAGTTTTCAAGTGTCTCCC
AATTTGAATCCTATAAAAATAAATGAATTGGCAATCCAGAAACGCCTCACTATTCGTGGAAAGGAAGATG
AAGCTAGCCCCTGTGACTATGTGTTACAGGTCAGTGGGAGAGTGGAGTATGTGTTTGGCGATCATCCACT
AATTCAGTTCCAGTACATCCGGAATTGTGTGATGAATAGAACCCTGCCCCACTTCATCCTTGTGGAATGT
TGTAAGATCAAGAAAATGTATGAACAAGAAATGATTGCCATAGAGGCTGCCATCAACCGAAACTCATCCA
ACCTTCCTCTCCCTTTACCACCAAAGAAAACGCGAGTTATTTCTCATATCTGGGACAACAACAACCCTTT
CCAAATTACCTTGGTTAAAGGAAATAAGCTTAATACAGAAGAAACTGTGAAAGTTCATGTCCGAGCTGGG
CTTTTTCACGGAACCGAGCTCCTGTGTAAAACCGTCGTAAGCTCAGAGATATCAGGAAAGAACGACCATA
TTTGGAATGAACAACTGGAATTTGATATTAATATTTGTGACTTACCAAGAATGGCTCGATTATGTTTTGC
TGTTTATGCAGTTTTGGATAAAGTAAAAACGAAGAAATCAACAAAGACTATTAATCCCTCTAAGTATCAG
ACCATCAGGAAAGCCGGGAAAGTGCATTATCCTGTCGCATGGGTAAATACCATGGTTTTTGACTTCAAAG
GACAGCTGAGGTCTGGAGACGTCATATTGCATAGCTGGTCTTCGTTTCCTGATGAGCTGGAAGAAATGCT
GAATCCCATGGGGACTGTGCAGACGAACCCATATGCTGAGAACGCCACCGCCTTGCACATTACGTTCCCA
GAGAATAAGAAGCAGCCGTGTTATTATCCCCCCTTCGATAAGATCATTGAGAAGGCAGCTGAGCTTGCCA
GCGGAGACAGTGCTAATGTGTCAAGTCGTGGTGGAAAAAAATTTCTTGCTGTGCTGAAAGAAATCTTGGA
CAGGGACCCCCTGTCTCAGCTGTGTGAGAACGAAATGGACCTTATTTGGACTCTACGGCAAGACTGCCGA
GAAAATTTCCCTCAGTCACTGCCAAAACTACTCTTGTCAATCAAGTGGAATAAACTTGAAGATGTTGCTC
AGCTTCAGGCGCTCCTGCAGATATGGCCCAAACTGCCCCCCAGGGAAGCCCTGGAACTCCTGGATTTCAA
CTATCCAGACCAGTATGTCCGGGAATACGCTGTAGGCTGCCTTCGACAGATGAGTGATGAAGAACTCTCT
CAGTATCTTTTACAATTGGTGCAAGTTTTGAAATATGAGCCTTTTCTCGATTGTGCCCTCTCCAGATTCC
TATTAGAAAGAGCACTTGATAATCGGAGGATTGGGCAGTTTCTGTTTTGGCATCTTAGGTCAGAGGTGCA
CACTCCTGCTGTGTCCGTACAGTTTGGTGTCATCCTGGAAGCATACTGTCGAGGAAGCGTGGGGCACATG
AAAGTGCTTTCCAAACAGGTGGAAGCACTCAATAAGTTAAAAACTTTAAATAGCTTAATCAAACTGAATG
CGGTGAAGCTGAGCAGAGCTAAGGGAAAGGAGGCCATGCACACGTGCCTGAAACAGAGTGCTTACCGGGA
GGCGCTCTCTGACCTGCAGTCGCCGCTGAACCCCTGCGTCATCCTCTCAGAGCTCTATGTTGAAAAGTGC
AAATACATGGACTCCAAGATGAAGCCCCTGTGGCTGGTCTACAGCAGCAGAGCCTTTGGAGAGGACTCGG
TTGGAGTGATCTTTAAAAATGGTGACGATTTGCGGCAGGACATGCTGACGCTGCAGATGTTGCGCCTGAT
GGATCTGCTTTGGAAAGAAGCTGGCTTGGACCTGCGGATGCTCCCCTATGGCTGCTTAGCAACAGGAGAT
CGCTCTGGCCTCATTGAGGTTGTGAGCACCTCTGAGACAATCGCTGACATTCAGCTGAACAGTAGTAACG
TGGCTGCCACGGCAGCCTTCAACAAAGACGCACTCCTGAACTGGCTCAAGGAGTACAACTCTGGGGATGA
CCTGGACCGAGCGATTGAGGAGTTTACCTTGTCCTGTGCTGGCTACTGTGTAGCCTCTTATGTCCTCGGC
ATTGGTGACAGGCACAGTGACAACATCATGGTGAAGAAAACCGGCCAGCTCTTCCACATAGATTTTGGGC
ATATTCTTGGAAATTTCAAATCTAAATTTGGCATTAAAAGGGAGCGAGTACCTTTTATTCTTACTTATGA
CTTCATTCATGTCATTCAACAAGGAAAAACGGGAAACACTGAAAAATTTGGCAGATTCCGCCAGTGCTGT
GAAGATGCGTATCTGATTTTACGGCGGCATGGGAATCTCTTCATCACCCTGTTTGCCCTGATGTTGACTG
CAGGGCTGCCTGAGCTCACATCGGTCAAAGATATACAGTATCTTAAGGACTCGCTTGCCTTAGGGAAGAG
CGAGGAGGAAGCACTGAAGCAGTTCAAGCAGAAGTTTGACGAGGCCCTCAGGGAAAGCTGGACTACTAAA
GTGAACTGGATGGCTCACACAGTACGGAAAGACTACAGGTCCTAG

Translation (1064 aa):
MPPAMADNLDIWAVDSQIASDGAISVDFLLPTGIYIQLEVPREATISYIKQMLWKQVHNYPMFNLLMDID
SYMFACVNQTAVYEELEDETRRLCDVRPFLPVLKLVTRSCDPAEKLDSKIGVLIGKGLHEFDALKDPEVN
EFRRKMRKFSEAKIQSLVGLSWIDWLKHTYPPEHEPSVLENLEDKLYGGKLVVAVHFENSQDVFSFQVSP
NLNPIKINELAIQKRLTIRGKEDEASPCDYVLQVSGRVEYVFGDHPLIQFQYIRNCVMNRTLPHFILVEC
CKIKKMYEQEMIAIEAAINRNSSNLPLPLPPKKTRVISHIWDNNNPFQITLVKGNKLNTEETVKVHVRAG
LFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCFAVYAVLDKVKTKKSTKTINPSKYQ
TIRKAGKVHYPVAWVNTMVFDFKGQLRSGDVILHSWSSFPDELEEMLNPMGTVQTNPYAENATALHITFP
ENKKQPCYYPPFDKIIEKAAELASGDSANVSSRGGKKFLAVLKEILDRDPLSQLCENEMDLIWTLRQDCR
ENFPQSLPKLLLSIKWNKLEDVAQLQALLQIWPKLPPREALELLDFNYPDQYVREYAVGCLRQMSDEELS
QYLLQLVQVLKYEPFLDCALSRFLLERALDNRRIGQFLFWHLRSEVHTPAVSVQFGVILEAYCRGSVGHM
KVLSKQVEALNKLKTLNSLIKLNAVKLSRAKGKEAMHTCLKQSAYREALSDLQSPLNPCVILSELYVEKC
KYMDSKMKPLWLVYSSRAFGEDSVGVIFKNGDDLRQDMLTLQMLRLMDLLWKEAGLDLRMLPYGCLATGD
RSGLIEVVSTSETIADIQLNSSNVAATAAFNKDALLNWLKEYNSGDDLDRAIEEFTLSCAGYCVASYVLG
IGDRHSDNIMVKKTGQLFHIDFGHILGNFKSKFGIKRERVPFILTYDFIHVIQQGKTGNTEKFGRFRQCC
EDAYLILRRHGNLFITLFALMLTAGLPELTSVKDIQYLKDSLALGKSEEEALKQFKQKFDEALRESWTTK
VNWMAHTVRKDYRS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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