NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
The CCDS database will be unavailable on Tuesday, May 21, 2024, starting at 8:00 a.m. EDT for up to 60 minutes.
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS23629.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23629.1 Public Mus musculus 9 Entpd3 23 108 98 CCDS HistoryNCBI Gene:215446Re-query CCDS DB by CCDS ID:23629.1Re-query CCDS DB by GeneID:215446See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 23629.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000047687.8 ENSMUSP00000036830.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000047687.8Link to Ensembl Protein Viewer:ENSMUSP00000036830.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000047687Re-query CCDS DB by Protein ID:ENSMUSP00000036830
Original member Current member NCBI NM_178676.5 NP_848791.3 Accepted alive Link to Nucleotide Sequence:NM_178676.5Link to Protein Sequence:NP_848791.3Re-query CCDS DB by Nucleotide ID:NM_178676Re-query CCDS DB by Protein ID:NP_848791Link to BLAST:NP_848791.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_848791.3 529 Q8BFW6 529 100% 0 0

Chromosomal Locations for CCDS 23629.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 120540664 120540703 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 120543959 120544086 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 120554069 120554186 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 120555645 120555795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 120557392 120557551 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 120558336 120558569 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 120560481 120560753 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 120560921 120561031 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 120561899 120562036 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 120566306 120566542 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1590 nt):
ATGTTTACCGTGATGACCCGCCAGCCATGTGAACAGGCAGGCTTCAGGGCCCTCTCGAGGACTCCTGCCA
TCGTCACCTTGGTGGTCCTGCTTGTGAGCATTGTGGTACTTGTGACACTTACACTCATCCAGATCCGCCA
CCCACAGGTTCTCCCTCCGGGGCTGAAGTATGGCGTCGTGCTCGATGCTGGCTCTTCCAGAACCACTGTC
TACGTGTATCAGTGGCCGGCAGAGAAGGAGAATAACACAGGAGTGGTCAGCCAAACTTTCAGATGCAGTG
TGAAAGGCTCTGGGATCTCCAGCTATGAGAATAACCCCCAAGATGCCCCCAAAGCCTTTGAGGACTGTAT
ACTAAAGGTCAAGGAACAGGTCCCAGAGCACCTCCACGGATCCACCCGCATTTACCTGGGAGCTACAGCT
GGGATGCGCTTGCTGAGGTTGCAGAATGAGACAGCAGCTCGTGAAGTCCTTGAGAGCATCCAAAGCTACT
TCAAGTCCCAGCCTTTTGATTTTAGGGGTGCTCAAATCATTTCTGGGCAAGAGGAAGGGGTGTATGGATG
GATTACAGCCAACTATATAATGGGAAATTTCCTGGAGAAGAACCTGTGGCACATGTGGGTGCACCCGCAC
GGAGTCGACACCACAGGAGCCCTGGATTTAGGTGGCGCCTCCACCCAGATATCCTTCGTGGCCGGGGAGA
AGATGGAGCCGAACGCCAGCGACACGGTGCAGGTGTCTCTGTACGGCTACACGTACACTCTCTACACACA
CAGCTTCCAGTGCTATGGCCAGAATGAAGCAGAGAAGAAGTTCCTGGCCATGCTTCTACAGAGCCCTTCC
ACGGAAGCCAACATCAGCAACCCCTGCTACCCTCAGGGCTACAGTACCGCCTTCACCTTGGGCCATGTGT
TTGGCAGCCTGTGCACAGAGAAGCAGAGGCCAGAGAGCTACAACTCCAGTAAGAGCGTCACCTTCATGGG
AACTGGTGACCCACGACTGTGCAGGGAGAAGGTGGCTTCTGTGTTTGACTTCAATGCTTGCCAAGAGCAA
GACGCCTGTTCCTTTGATGGCATTTACCAGCCCAAGGTTCAAGGGCCATTTGTGGCGTTCGCAGGCTTCT
ACTACACAGCCAGTGCGCTAAACCTCTCAGGAAGCTTCTCCCTTACCTCCTTCAATGACAGCAGCTGGGA
CTTCTGCAGACACACTTGGAGCGAGCTCCCAGCCCTGCTCTCCAGATTTGATGAGACGTATGCCCGGTCC
TACTGCTTCTCAGCCCACTACATCTACCACTTGCTCGTAAATGGATACAAGTTCACTGAGGAGACTTGGC
CTCAGATACGCTTTGAAAAAGAAGTGGGGAACAGCAGCATCGCCTGGTCCCTTGGCTACATGCTCAGCTT
GACCAACCAGATCCCAGCTGGAAGTCCCCTGATCCATCTACCCATACAGCCACCGGTGTTTATGGGAGTC
CTGGCCTTCTTCACAGCTATCGCCTTGCTGTGCCTGGCATTTCTTCTGTATCTATGTTCATCATTCAGGA
CAAAGGAGCGCTCTGAGAATGCCTTCGACCAAGCAGTGGATTCTGATTGA

Translation (529 aa):
MFTVMTRQPCEQAGFRALSRTPAIVTLVVLLVSIVVLVTLTLIQIRHPQVLPPGLKYGVVLDAGSSRTTV
YVYQWPAEKENNTGVVSQTFRCSVKGSGISSYENNPQDAPKAFEDCILKVKEQVPEHLHGSTRIYLGATA
GMRLLRLQNETAAREVLESIQSYFKSQPFDFRGAQIISGQEEGVYGWITANYIMGNFLEKNLWHMWVHPH
GVDTTGALDLGGASTQISFVAGEKMEPNASDTVQVSLYGYTYTLYTHSFQCYGQNEAEKKFLAMLLQSPS
TEANISNPCYPQGYSTAFTLGHVFGSLCTEKQRPESYNSSKSVTFMGTGDPRLCREKVASVFDFNACQEQ
DACSFDGIYQPKVQGPFVAFAGFYYTASALNLSGSFSLTSFNDSSWDFCRHTWSELPALLSRFDETYARS
YCFSAHYIYHLLVNGYKFTEETWPQIRFEKEVGNSSIAWSLGYMLSLTNQIPAGSPLIHLPIQPPVFMGV
LAFFTAIALLCLAFLLYLCSSFRTKERSENAFDQAVDSD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH