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Report for CCDS24015.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24015.1 Public Mus musculus 10 Ndufs7 23 108 98 CCDS HistoryNCBI Gene:75406Re-query CCDS DB by CCDS ID:24015.1Re-query CCDS DB by GeneID:75406See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 24015.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000020361.6 ENSMUSP00000020361.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000020361.6Link to Ensembl Protein Viewer:ENSMUSP00000020361.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000020361Re-query CCDS DB by Protein ID:ENSMUSP00000020361
Original member Current member EBI ENSMUST00000105364.7 ENSMUSP00000101003.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000105364.7Link to Ensembl Protein Viewer:ENSMUSP00000101003.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000105364Re-query CCDS DB by Protein ID:ENSMUSP00000101003
Original member Current member NCBI NM_029272.4 NP_083548.1 Accepted alive Link to Nucleotide Sequence:NM_029272.4Link to Protein Sequence:NP_083548.1Re-query CCDS DB by Nucleotide ID:NM_029272Re-query CCDS DB by Protein ID:NP_083548Link to BLAST:NP_083548.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_083548.1 224 Q9DC70 224 100% 0 0

Chromosomal Locations for CCDS 24015.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 80249476 80249491 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80252397 80252433 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80253074 80253157 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80253660 80253783 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80254840 80255019 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80255090 80255136 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80255924 80256012 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80256636 80256733 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (675 nt):
ATGGCGGCGCTGGCGGCTCCTGGCCTGCTCTCTGTACGGATCCTGGGTCTGCGCACAGCACAGGTCCAGC
TGCGCAGAGTTCATCAGAGTGTAGCCACTGAGGGCCCGAGCCCGAGCCCAAGCCCGAGCCTGAGCAGCAC
ACAGTCTGCTGTGTCCAAGGCTGGAGCTGGAGCCGTGGTCCCCAAGCTCTCTCATCTTCCCCGAAGCCGG
GCTGAGTATGTGGTGACCAAGCTGGATGACCTCATCAACTGGGCACGCCGGAGCTCCCTGTGGCCTATGA
CCTTCGGCCTGGCGTGCTGTGCCGTGGAGATGATGCACATGGCTGCGCCGCGCTATGACATGGACCGCTT
CGGTGTGGTGTTCCGTGCCAGTCCGCGCCAGGCTGATGTGATGATTGTAGCTGGCACGCTTACCAACAAG
ATGGCCCCCGCGCTCCGAAAGGTGTACGACCAGATGCCCGAACCCCGCTATGTGGTGTCCATGGGGAGCT
GTGCCAATGGCGGTGGCTACTACCACTACTCCTACTCGGTTGTTCGTGGCTGTGACCGCATTGTGCCAGT
GGACATCTATGTGCCAGGCTGCCCGCCCACGGCCGAAGCACTCCTTTATGGCATCTTGCAGCTGCAACGG
AAGATCAAGCGTGAACAGAAGCTGAAGATCTGGTACCGCAGGTAG

Translation (224 aa):
MAALAAPGLLSVRILGLRTAQVQLRRVHQSVATEGPSPSPSPSLSSTQSAVSKAGAGAVVPKLSHLPRSR
AEYVVTKLDDLINWARRSSLWPMTFGLACCAVEMMHMAAPRYDMDRFGVVFRASPRQADVMIVAGTLTNK
MAPALRKVYDQMPEPRYVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQR
KIKREQKLKIWYRR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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