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Report for CCDS24210.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24210.1 Public Mus musculus 10 Gns 23 108 98 CCDS HistoryNCBI Gene:75612Re-query CCDS DB by CCDS ID:24210.1Re-query CCDS DB by GeneID:75612See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 24210.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000040344.6 ENSMUSP00000043167.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000040344.6Link to Ensembl Protein Viewer:ENSMUSP00000043167.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000040344Re-query CCDS DB by Protein ID:ENSMUSP00000043167
Original member Current member NCBI NM_029364.4 NP_083640.1 Accepted alive Link to Nucleotide Sequence:NM_029364.4Link to Protein Sequence:NP_083640.1Re-query CCDS DB by Nucleotide ID:NM_029364Re-query CCDS DB by Protein ID:NP_083640Link to BLAST:NP_083640.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_083640.1 544 Q8BFR4 544 100% 0 0

Chromosomal Locations for CCDS 24210.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 121365191 121365358 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 121371144 121371203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 121374358 121374564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 121376208 121376273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 121376636 121376734 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 121378022 121378189 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 121380118 121380200 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 121381173 121381291 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 121383340 121383443 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 121388101 121388202 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 121390624 121390731 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 121391371 121391481 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 121392681 121392841 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 121395048 121395126 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1635 nt):
ATGCGGCTCCCTTCGGCAGCCGGGCCCCGGCCGGGCCGTCCCCGCCGCCTGCCGGCGCTGCTGCTGCTGC
CGCTGCTGGGAGGCTGCCTGGGGCTCGTGGGGGCGGCTCGCAGGCCCAACGTGCTGCTGCTGCTCACCGA
CGACCAGGACGCGGAGCTCGGCGGCATGACGCCACTGAAGAAAACCAAGGCCCTCATCGGAGAGAAGGGG
ATGACTTTCTCTAGCGCCTATGTGCCCAGTGCTCTTTGCTGCCCCAGCAGAGCCAGCATCCTGACTGGAA
AGTACCCCCACAACCACCACGTCGTTAACAACACTTTGGAAGGGAACTGCAGTAGCAAGGCCTGGCAGAA
GATCCAGGAGCCGTACACCTTCCCGGCCATCCTCAAGTCGGTGTGCGGCTATCAGACCTTTTTTGCTGGG
AAGTATTTAAACGAGTATGGAGCCCCAGACGCAGGCGGACTGGAGCACATCCCCCTGGGCTGGAGTTACT
GGTATGCCCTGGAAAAGAATTCTAAATACTATAACTACACCCTCTCCATCAACGGGAAGGCACGGAAGCA
CGGCGAGAACTACAGCGTGGACTACCTGACAGATGTTCTGGCCAACCTCTCCCTGGACTTCCTGGACTAC
AAGTCCAACTCTGAGCCATTCTTCATGATGATCTCCACTCCAGCGCCCCACTCACCGTGGACGGCTGCTC
CGCAGTACCAGAAGGCTTTCCAGAATGTCATCGCACCAAGAAACAAGAACTTCAACATCCACGGGACGAA
CAAGCACTGGCTAATCAGGCAAGCCAAGACTCCCATGACGAACTCGTCAATACGGTTCTTAGATGACGCC
TTCAGGAGGAGGTGGCAAACCCTGCTCTCAGTTGACGACCTTGTGGAGAAACTGGTGAAGAGACTGGACT
CGACCGGAGAGCTGGACAACACGTATATCTTCTATACCTCAGACAACGGCTACCACACAGGGCAGTTCTC
TTTGCCAATAGACAAACGGCAGCTGTATGAGTTTGATATCAAAGTTCCACTGTTGGTTCGAGGGCCCGGC
ATCAAACCAAACCAGACCAGCAAGATGCTGGTCTCAAACATCGACTTGGGTCCCACCATCCTGGACCTCG
CTGGCTATGACCTGAACAAGACACAGATGGATGGGATGTCCCTGCTGCCCATTCTGAAAGGAGACAGAAA
CTTAACCTGGAGGTCAGACGTGCTGGTGGAATATCAAGGAGAAGGCCGGAATGTCACCGACCCGACCTGC
CCTTCTTTGAGTCCTGGAGTGTCTCAATGTTTCCCGGACTGTGTGTGTGAAGACGCGTACAACAATACCT
ACGCCTGCGTGCGGACACTGTCATCATTGTGGAACCTCCAGTACTGCGAGTTCGACGACCAGGAGGTATT
TGTCGAAGTCTACAATATCACTGCAGATCCAGACCAGATCACCAACATTGCCAAGAGTATAGACCCTGAG
CTTTTGGGAAAGATGAACTATCGTCTGATGATGCTGCAGTCCTGTTCTGGGCCGACCTGTCGCACTCCAG
GGGTCTTTGACCCTGGGTACAGGTTTGACCTGCGTCTCATGTTCAACAGTCACGGCAGCGTCAGAACGAG
AAGGTTCTCGAAGCATCCGCTCTAG

Translation (544 aa):
MRLPSAAGPRPGRPRRLPALLLLPLLGGCLGLVGAARRPNVLLLLTDDQDAELGGMTPLKKTKALIGEKG
MTFSSAYVPSALCCPSRASILTGKYPHNHHVVNNTLEGNCSSKAWQKIQEPYTFPAILKSVCGYQTFFAG
KYLNEYGAPDAGGLEHIPLGWSYWYALEKNSKYYNYTLSINGKARKHGENYSVDYLTDVLANLSLDFLDY
KSNSEPFFMMISTPAPHSPWTAAPQYQKAFQNVIAPRNKNFNIHGTNKHWLIRQAKTPMTNSSIRFLDDA
FRRRWQTLLSVDDLVEKLVKRLDSTGELDNTYIFYTSDNGYHTGQFSLPIDKRQLYEFDIKVPLLVRGPG
IKPNQTSKMLVSNIDLGPTILDLAGYDLNKTQMDGMSLLPILKGDRNLTWRSDVLVEYQGEGRNVTDPTC
PSLSPGVSQCFPDCVCEDAYNNTYACVRTLSSLWNLQYCEFDDQEVFVEVYNITADPDQITNIAKSIDPE
LLGKMNYRLMMLQSCSGPTCRTPGVFDPGYRFDLRLMFNSHGSVRTRRFSKHPL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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