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Report for CCDS2436.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2436.1 Public Homo sapiens 2 ABCB6 24 110 108 CCDS HistoryNCBI Gene:10058Re-query CCDS DB by CCDS ID:2436.1Re-query CCDS DB by GeneID:10058See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2436.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000265316.9 ENSP00000265316.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000265316.9Link to Ensembl Protein Viewer:ENSP00000265316.3Re-query CCDS DB by Nucleotide ID:ENST00000265316Re-query CCDS DB by Protein ID:ENSP00000265316
Original member Current member NCBI NM_005689.4 NP_005680.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005689.4Link to Protein Sequence:NP_005680.1Re-query CCDS DB by Nucleotide ID:NM_005689Re-query CCDS DB by Protein ID:NP_005680Link to BLAST:NP_005680.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_005680.1 842 Q9NP58-1 842 100% 0 0

Chromosomal Locations for CCDS 2436.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 219209938 219210046 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219210230 219210298 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219210381 219210475 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219210711 219210823 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219210934 219211108 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219212387 219212491 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219213008 219213065 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219213241 219213326 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219213439 219213502 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219213590 219213666 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219213826 219213951 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219214121 219214186 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219214389 219214498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219214961 219215082 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219215997 219216180 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219216364 219216465 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219216652 219216832 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219217670 219217807 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219218125 219218673 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2529 nt):
ATGGTGACTGTGGGCAACTACTGCGAGGCCGAAGGGCCCGTGGGTCCGGCCTGGATGCAGGATGGCCTGA
GTCCCTGCTTCTTCTTCACGCTCGTGCCCTCGACGCGGATGGCTCTGGGGACTCTGGCCTTGGTGCTGGC
TCTTCCCTGCAGACGCCGGGAGCGGCCCGCTGGTGCTGATTCGCTGTCTTGGGGGGCCGGCCCTCGCATC
TCTCCCTACGTGCTGCAGCTGCTTCTGGCCACACTTCAGGCGGCGCTGCCCCTGGCCGGCCTGGCTGGCC
GGGTGGGCACTGCCCGGGGGGCCCCACTGCCAAGCTATCTACTTCTGGCCTCCGTGCTGGAGAGTCTGGC
CGGCGCCTGTGGCCTGTGGCTGCTTGTCGTGGAGCGGAGCCAGGCACGGCAGCGTCTGGCAATGGGCATC
TGGATCAAGTTCAGGCACAGCCCTGGTCTCCTGCTCCTCTGGACTGTGGCGTTTGCAGCTGAGAACTTGG
CCCTGGTGTCTTGGAACAGCCCACAGTGGTGGTGGGCAAGGGCAGACTTGGGCCAGCAGGTTCAGTTTAG
CCTGTGGGTGCTGCGGTATGTGGTCTCTGGAGGGCTGTTTGTCCTGGGTCTCTGGGCCCCTGGACTTCGT
CCCCAGTCCTATACATTGCAGGTTCATGAAGAGGACCAAGATGTGGAAAGGAGCCAGGTTCGGTCAGCAG
CCCAACAGTCTACCTGGCGAGATTTTGGCAGGAAGCTCCGCCTCCTGAGTGGCTACCTGTGGCCTCGAGG
GAGTCCAGCTCTGCAGCTGGTGGTGCTCATCTGCCTGGGGCTCATGGGTTTGGAACGGGCACTCAATGTG
TTGGTGCCTATATTCTATAGGAACATTGTGAACTTGCTGACTGAGAAGGCACCTTGGAACTCTCTGGCCT
GGACTGTTACCAGTTACGTCTTCCTCAAGTTCCTCCAGGGGGGTGGCACTGGCAGTACAGGCTTCGTGAG
CAACCTGCGCACCTTCCTGTGGATCCGGGTGCAGCAGTTCACGTCTCGGCGGGTGGAGCTGCTCATCTTC
TCCCACCTGCACGAGCTCTCACTGCGCTGGCACCTGGGGCGCCGCACAGGGGAGGTGCTGCGGATCGCGG
ATCGGGGCACATCCAGTGTCACAGGGCTGCTCAGCTACCTGGTGTTCAATGTCATCCCCACGCTGGCCGA
CATCATCATTGGCATCATCTACTTCAGCATGTTCTTCAACGCCTGGTTTGGCCTCATTGTGTTCCTGTGC
ATGAGTCTTTACCTCACCCTGACCATTGTGGTCACTGAGTGGAGAACCAAGTTTCGTCGTGCTATGAACA
CACAGGAGAACGCTACCCGGGCACGAGCAGTGGACTCTCTGCTAAACTTCGAGACGGTGAAGTATTACAA
CGCCGAGAGTTACGAAGTGGAACGCTATCGAGAGGCCATCATCAAATATCAGGGTTTGGAGTGGAAGTCG
AGCGCTTCACTGGTTTTACTAAATCAGACCCAGAACCTGGTGATTGGGCTCGGGCTCCTCGCCGGCTCCC
TGCTTTGCGCATACTTTGTCACTGAGCAGAAGCTACAGGTTGGGGACTATGTGCTCTTTGGCACCTACAT
TATCCAGCTGTACATGCCCCTCAATTGGTTTGGCACCTACTACAGGATGATCCAGACCAACTTCATTGAC
ATGGAGAACATGTTTGACTTGCTGAAAGAGGAGACAGAAGTGAAGGACCTTCCTGGAGCAGGGCCCCTTC
GCTTTCAGAAGGGCCGTATTGAGTTTGAGAACGTGCACTTCAGCTATGCCGATGGGCGGGAGACTCTGCA
GGACGTGTCTTTCACTGTGATGCCTGGACAGACACTTGCCCTGGTGGGCCCATCTGGGGCAGGGAAGAGC
ACAATTTTGCGCCTGCTGTTTCGCTTCTACGACATCAGCTCTGGCTGCATCCGAATAGATGGGCAGGACA
TTTCACAGGTGACCCAGGCCTCTCTCCGGTCTCACATTGGAGTTGTGCCCCAAGACACTGTCCTCTTTAA
TGACACCATCGCCGACAATATCCGTTACGGCCGTGTCACAGCTGGGAATGATGAGGTGGAGGCTGCTGCT
CAGGCTGCAGGCATCCATGATGCCATTATGGCTTTCCCTGAAGGGTACAGGACACAGGTGGGCGAGCGGG
GACTGAAGCTGAGCGGCGGGGAGAAGCAGCGCGTCGCCATTGCCCGCACCATCCTCAAGGCTCCGGGCAT
CATTCTGCTGGATGAGGCAACGTCAGCGCTGGATACATCTAATGAGAGGGCCATCCAGGCTTCTCTGGCC
AAAGTCTGTGCCAACCGCACCACCATCGTAGTGGCACACAGGCTCTCAACTGTGGTCAATGCTGACCAGA
TCCTCGTCATCAAGGATGGCTGCATCGTGGAGAGGGGACGACACGAGGCTCTGTTGTCCCGAGGTGGGGT
GTATGCTGACATGTGGCAGCTGCAGCAGGGACAGGAAGAAACCTCTGAAGACACTAAGCCTCAGACCATG
GAACGGTGA

Translation (842 aa):
MVTVGNYCEAEGPVGPAWMQDGLSPCFFFTLVPSTRMALGTLALVLALPCRRRERPAGADSLSWGAGPRI
SPYVLQLLLATLQAALPLAGLAGRVGTARGAPLPSYLLLASVLESLAGACGLWLLVVERSQARQRLAMGI
WIKFRHSPGLLLLWTVAFAAENLALVSWNSPQWWWARADLGQQVQFSLWVLRYVVSGGLFVLGLWAPGLR
PQSYTLQVHEEDQDVERSQVRSAAQQSTWRDFGRKLRLLSGYLWPRGSPALQLVVLICLGLMGLERALNV
LVPIFYRNIVNLLTEKAPWNSLAWTVTSYVFLKFLQGGGTGSTGFVSNLRTFLWIRVQQFTSRRVELLIF
SHLHELSLRWHLGRRTGEVLRIADRGTSSVTGLLSYLVFNVIPTLADIIIGIIYFSMFFNAWFGLIVFLC
MSLYLTLTIVVTEWRTKFRRAMNTQENATRARAVDSLLNFETVKYYNAESYEVERYREAIIKYQGLEWKS
SASLVLLNQTQNLVIGLGLLAGSLLCAYFVTEQKLQVGDYVLFGTYIIQLYMPLNWFGTYYRMIQTNFID
MENMFDLLKEETEVKDLPGAGPLRFQKGRIEFENVHFSYADGRETLQDVSFTVMPGQTLALVGPSGAGKS
TILRLLFRFYDISSGCIRIDGQDISQVTQASLRSHIGVVPQDTVLFNDTIADNIRYGRVTAGNDEVEAAA
QAAGIHDAIMAFPEGYRTQVGERGLKLSGGEKQRVAIARTILKAPGIILLDEATSALDTSNERAIQASLA
KVCANRTTIVVAHRLSTVVNADQILVIKDGCIVERGRHEALLSRGGVYADMWQLQQGQEETSEDTKPQTM
ER


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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