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Report for CCDS24762.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24762.2 Public Mus musculus 11 Guk1 23 108 98 CCDS HistoryNCBI Gene:14923Re-query CCDS DB by CCDS ID:24762.2Re-query CCDS DB by GeneID:14923See the combined annotation on chromosome 11 in Sequence Viewer

Public Note for CCDS 24762.2
The coding region has been updated to extend the N-terminus to one that is more supported by available transcript and conservation data.

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 24762.2

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000170202.8 ENSMUSP00000127566.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000170202.8Link to Ensembl Protein Viewer:ENSMUSP00000127566.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000170202Re-query CCDS DB by Protein ID:ENSMUSP00000127566
Original member NCBI NM_008193.3 NP_032219.2 Updated not alive Link to Nucleotide Sequence:NM_008193.3Link to Protein Sequence:NP_032219.2Re-query CCDS DB by Nucleotide ID:NM_008193Re-query CCDS DB by Protein ID:NP_032219
Current member NCBI NM_008193.4 NP_032219.2 Accepted alive Link to Nucleotide Sequence:NM_008193.4Link to Protein Sequence:NP_032219.2Re-query CCDS DB by Nucleotide ID:NM_008193Re-query CCDS DB by Protein ID:NP_032219Link to BLAST:NP_032219.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032219.2 219 Q64520-2 219 100% 0 0

Chromosomal Locations for CCDS 24762.2

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 59184152 59184187 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 59184436 59184521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 59185029 59185113 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 59185194 59185332 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 59185942 59186038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 59186400 59186441 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 59186774 59186887 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 59191751 59191811 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (660 nt):
ATGCTGCGGCGCCCGCTGGTCGGGCTGGCGGTGGCCGCCCTGGGTCGGGTCCCCGCGGACGGCATGGCAG
GACCTAGGCCAGTAGTGCTGAGCGGGCCGTCAGGGGCAGGGAAGAGCACTCTGCTCAAGAAGCTGTTCCA
GGAGCACAGCAGCATCTTCGGCTTCAGCGTGTCTCATACTACAAGGAACCCACGACCTGGTGAAGAAGAT
GGCAAAGATTACTACTTTGTGACCAGGGAGATGATGCAGCGTGATATTGCAGCAGGGGACTTCATTGAGC
ATGCTGAGTTCTCAGGGAACCTGTACGGGACAAGCAAGGAAGCTGTTCGGGCTGTGCAGGCCATGAACCG
CATCTGCGTGCTAGATGTCGACCTACAAGGTGTGCGCAGCATCAAGAAGACTGATCTGTGTCCCATCTAC
ATCTTTGTGCAGCCTCCCTCGCTGGACGTGCTGGAGCAACGACTGCGACTGCGCAACACTGAGACTGAGG
AGAGTCTGGCAAAGCGGCTGGCAGCTGCACGGACAGACATGGAGAGCAGCAAGGAGCCTGGCTTGTTTGA
CCTGGTGATCATCAATGACGACCTGGATAAAGCCTATGCAACCCTGAAGCAGGCGCTCTCTGAGGAAATC
AAGAAAGCACAGGGAACTGGCCACGCCTGA

Translation (219 aa):
MLRRPLVGLAVAALGRVPADGMAGPRPVVLSGPSGAGKSTLLKKLFQEHSSIFGFSVSHTTRNPRPGEED
GKDYYFVTREMMQRDIAAGDFIEHAEFSGNLYGTSKEAVRAVQAMNRICVLDVDLQGVRSIKKTDLCPIY
IFVQPPSLDVLEQRLRLRNTETEESLAKRLAAARTDMESSKEPGLFDLVIINDDLDKAYATLKQALSEEI
KKAQGTGHA


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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