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Report for CCDS25491.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
25491.1 Public Mus musculus 11 G6pc3 23 108 98 CCDS HistoryNCBI Gene:68401Re-query CCDS DB by CCDS ID:25491.1Re-query CCDS DB by GeneID:68401See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 25491.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000070334.9 ENSMUSP00000064276.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000070334.9Link to Ensembl Protein Viewer:ENSMUSP00000064276.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000070334Re-query CCDS DB by Protein ID:ENSMUSP00000064276
Original member Current member EBI ENSMUST00000078975.7 ENSMUSP00000077995.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000078975.7Link to Ensembl Protein Viewer:ENSMUSP00000077995.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000078975Re-query CCDS DB by Protein ID:ENSMUSP00000077995
Original member Current member NCBI NM_175935.3 NP_787949.2 Accepted alive Link to Nucleotide Sequence:NM_175935.3Link to Protein Sequence:NP_787949.2Re-query CCDS DB by Nucleotide ID:NM_175935Re-query CCDS DB by Protein ID:NP_787949Link to BLAST:NP_787949.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_787949.2 346 Q6NSQ9 346 100% 0 0

Chromosomal Locations for CCDS 25491.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 102189926 102190143 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 102192035 102192141 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 102192473 102192563 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 102192749 102192867 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 102193085 102193226 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 102193443 102193806 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1041 nt):
ATGGAGTCCACGCTGAGCGCGGGCATCATAATGGCTGAAGCACTACAGAACCGGCTTCCCGGGCTAGAGA
ATATGTGGCTCTGGGTCACCTTTCTGGGCGATCCTAAGAATCTTTTTCAGTTCTGCTTCCCCGCGGCCTA
CTACGCCTCCCGCCGCCTGGGCATCTCCGTGCTCTGGATCACCTTCATTGCTGAGTGGCTCAACCTTGTC
TTCAAGTGGTTTCTGTTTGGAGACAGGCCCTTTTGGTGGGTGCATGAATCCGGGTACTCCACCCAGACTC
CAATCCAGATTCACCAGTTCCCTTCTTCTTGTGAGACTGGTCCAGGCAGCCCCTCCGGCCACTGCATGAT
CACAGGCGCAGCTCTTTGGCCTGTAATGACGGCCATTTCTTCTCAGGTGGCTTCTCGGTCCCGCAGCCCC
TGGGTGAGGGTGATTCCTGGCCTGGCTTATTGTACCTTCCTATTGGCAGTCGGCCTATCTCGGGTCTTCC
TCTTAGCACATTTCCCTCACCAAGTGTTGGGCGGCCTTATTGTTGGTGCTGCCCTTGGCTGGCTAATGAG
CCCCCGGGTACCCATGGAGCGGGAGCTTAGCTTTTATGGGTTGACTGCTCTGGCCCTCATGCTGGGTGCC
AGCCTCATGTATTGGACTCTCTTTACACTGGGCCTAGATCTTTCCTGGTCCATCAACCTGGCTTCCAAGT
GGTGTGAACGGCCCGAGTGGGTGCACATGGACAGTCGGCCTTTTGCCTCACTGAGCCGTGACTCAGGATC
TGCCCTGGGTCTGGGCATTGCCCTCCACACTCCCTGCTATGCCCAGATACGGCGGGCGCACCTAGGGAAT
GGCCAGAAAATAGCTTGCTTTGTGCTGGCCATGGGGCTGCTGGTCTTCCTGGAATGGCTGGGCTACCCAC
CTCAGATCAGCCTCTTCTACATCTTCAACTTCCTCAAGTATACCCTCTGGCCGTGCCTGGTCTTGGCCCT
TGTGCCCTGGGTGGTGCACACATTGAGTGACCAGGAAGCACCGCCCATTCGCTCCTCTTGA

Translation (346 aa):
MESTLSAGIIMAEALQNRLPGLENMWLWVTFLGDPKNLFQFCFPAAYYASRRLGISVLWITFIAEWLNLV
FKWFLFGDRPFWWVHESGYSTQTPIQIHQFPSSCETGPGSPSGHCMITGAALWPVMTAISSQVASRSRSP
WVRVIPGLAYCTFLLAVGLSRVFLLAHFPHQVLGGLIVGAALGWLMSPRVPMERELSFYGLTALALMLGA
SLMYWTLFTLGLDLSWSINLASKWCERPEWVHMDSRPFASLSRDSGSALGLGIALHTPCYAQIRRAHLGN
GQKIACFVLAMGLLVFLEWLGYPPQISLFYIFNFLKYTLWPCLVLALVPWVVHTLSDQEAPPIRSS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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