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Report for CCDS26045.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26045.1 Public Mus musculus 12 Entpd5 23 108 98 CCDS HistoryNCBI Gene:12499Re-query CCDS DB by CCDS ID:26045.1Re-query CCDS DB by GeneID:12499See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26045.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000021662.11 ENSMUSP00000021662.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000021662.11Link to Ensembl Protein Viewer:ENSMUSP00000021662.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000021662Re-query CCDS DB by Protein ID:ENSMUSP00000021662
Original member Current member EBI ENSMUST00000110272.8 ENSMUSP00000105901.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000110272.8Link to Ensembl Protein Viewer:ENSMUSP00000105901.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000110272Re-query CCDS DB by Protein ID:ENSMUSP00000105901
Original member Current member EBI ENSMUST00000120942.7 ENSMUSP00000112516.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000120942.7Link to Ensembl Protein Viewer:ENSMUSP00000112516.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000120942Re-query CCDS DB by Protein ID:ENSMUSP00000112516
Original member Current member EBI ENSMUST00000122194.7 ENSMUSP00000113106.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000122194.7Link to Ensembl Protein Viewer:ENSMUSP00000113106.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000122194Re-query CCDS DB by Protein ID:ENSMUSP00000113106
Original member Current member EBI ENSMUST00000117286.1 ENSMUSP00000114011.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000117286.1Link to Ensembl Protein Viewer:ENSMUSP00000114011.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000117286Re-query CCDS DB by Protein ID:ENSMUSP00000114011
Original member Current member NCBI NM_001026214.2 NP_001021385.1 Accepted alive Link to Nucleotide Sequence:NM_001026214.2Link to Protein Sequence:NP_001021385.1Re-query CCDS DB by Nucleotide ID:NM_001026214Re-query CCDS DB by Protein ID:NP_001021385Link to BLAST:NP_001021385.1
Original member Current member NCBI NM_001286049.1 NP_001272978.1 Accepted alive Link to Nucleotide Sequence:NM_001286049.1Link to Protein Sequence:NP_001272978.1Re-query CCDS DB by Nucleotide ID:NM_001286049Re-query CCDS DB by Protein ID:NP_001272978Link to BLAST:NP_001272978.1
Original member Current member NCBI NM_001286058.1 NP_001272987.1 Accepted alive Link to Nucleotide Sequence:NM_001286058.1Link to Protein Sequence:NP_001272987.1Re-query CCDS DB by Nucleotide ID:NM_001286058Re-query CCDS DB by Protein ID:NP_001272987Link to BLAST:NP_001272987.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001021385.1 427 Q9WUZ9 427 100% 0 0
NP_001272978.1 427 Q9WUZ9 427 100% 0 0
NP_001272987.1 427 Q9WUZ9 427 100% 0 0

Chromosomal Locations for CCDS 26045.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 12 (NC_000078.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 84377294 84377380 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 84379180 84379295 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 84380321 84380377 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 84382232 84382372 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 84384219 84384320 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 84385148 84385209 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 84385797 84385876 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 84386138 84386226 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 84386738 84386773 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 84386980 84387055 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 84392406 84392549 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 84394624 84394703 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 84396679 84396892 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1284 nt):
ATGGCCACTTCCTGGGGGGCTGTCTTCATGCTGATCATAGCCTGCGTTGGCAGCACTGTCTTCTACAGAG
AACAGCAGACCTGGTTTGAAGGTGTCTTCTTGTCTTCCATGTGCCCCATTAATGTCAGTGCCGGCACCTT
TTATGGAATTATGTTTGATGCGGGCAGCACTGGAACTCGGATTCATGTTTACACTTTTGTGCAGAAAACA
GCAGGACAGCTCCCCTTTCTGGAAGGTGAAATTTTTGATTCTGTGAAGCCGGGACTTTCTGCTTTTGTGG
ATCAGCCCAAACAGGGTGCTGAGACTGTCCAGGAGCTCTTGGAGGTGGCCAAAGACTCGATCCCCAGAAG
CCACTGGGAAAGGACCCCGGTGGTTCTGAAAGCAACGGCCGGACTCCGTTTGCTGCCTGAGCAGAAAGCC
CAGGCTCTGCTCTTGGAGGTAGAGGAGATCTTCAAGAATTCACCTTTCCTGGTCCCAGATGGCAGCGTTA
GCATCATGGATGGGTCCTATGAAGGCATACTAGCCTGGGTTACCGTGAACTTTCTAACAGGTCAGCTGCA
TGGTCGTGGCCAGGAGACTGTGGGGACCCTTGACCTGGGGGGTGCCTCCACCCAAATCACGTTTCTACCC
CAGTTTGAGAAAACCCTGGAACAAACACCTAGGGGCTACCTCACTTCCTTTGAGATGTTTAACAGCACTT
TTAAGCTCTATACACATAGTTACTTGGGATTTGGACTGAAAGCTGCAAGACTGGCAACTCTGGGAGCCCT
GGAAGCAAAAGGGACTGATGGACATACGTTTCGAAGTGCCTGTTTACCAAGATGGTTGGAAGCAGAGTGG
ATCTTTGGGGGTGTGAAATACCAGTATGGTGGTAACCAAGAAGGGGAGATGGGCTTTGAACCCTGCTATG
CGGAAGTGCTGAGGGTAGTACAGGGGAAACTTCACCAGCCAGAAGAAGTCCGAGGAAGCGCCTTCTACGC
TTTCTCTTACTACTACGATCGAGCCGCTGACACACACTTGATCGATTATGAAAAGGGCGGGGTTTTAAAA
GTTGAAGATTTTGAAAGAAAAGCCAGAGAAGTGTGTGACAACTTGGGGAGCTTCTCCTCGGGCAGTCCTT
TCCTCTGCATGGACCTCACTTACATCACAGCCCTGTTGAAAGATGGTTTTGGCTTTGCCGACGGCACCCT
CTTACAGCTCACAAAGAAAGTGAACAACATAGAGACTGGTTGGGCCTTGGGGGCCACCTTTCACCTGCTC
CAGTCTCTGGGCATCACCAGCTGA

Translation (427 aa):
MATSWGAVFMLIIACVGSTVFYREQQTWFEGVFLSSMCPINVSAGTFYGIMFDAGSTGTRIHVYTFVQKT
AGQLPFLEGEIFDSVKPGLSAFVDQPKQGAETVQELLEVAKDSIPRSHWERTPVVLKATAGLRLLPEQKA
QALLLEVEEIFKNSPFLVPDGSVSIMDGSYEGILAWVTVNFLTGQLHGRGQETVGTLDLGGASTQITFLP
QFEKTLEQTPRGYLTSFEMFNSTFKLYTHSYLGFGLKAARLATLGALEAKGTDGHTFRSACLPRWLEAEW
IFGGVKYQYGGNQEGEMGFEPCYAEVLRVVQGKLHQPEEVRGSAFYAFSYYYDRAADTHLIDYEKGGVLK
VEDFERKAREVCDNLGSFSSGSPFLCMDLTYITALLKDGFGFADGTLLQLTKKVNNIETGWALGATFHLL
QSLGITS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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