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Report for CCDS26225.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26225.1 Public Mus musculus 13 Akr1c21 23 108 98 CCDS HistoryNCBI Gene:77337Re-query CCDS DB by CCDS ID:26225.1Re-query CCDS DB by GeneID:77337See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26225.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000021628.3 ENSMUSP00000021628.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000021628.3Link to Ensembl Protein Viewer:ENSMUSP00000021628.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000021628Re-query CCDS DB by Protein ID:ENSMUSP00000021628
Original member Current member NCBI NM_029901.2 NP_084177.2 Accepted alive Link to Nucleotide Sequence:NM_029901.2Link to Protein Sequence:NP_084177.2Re-query CCDS DB by Nucleotide ID:NM_029901Re-query CCDS DB by Protein ID:NP_084177Link to BLAST:NP_084177.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_084177.2 323 Q91WR5 323 100% 0 0

Chromosomal Locations for CCDS 26225.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 4574149 4574232 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 4575156 4575323 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 4576231 4576347 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 4577070 4577147 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 4577356 4577478 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 4580280 4580389 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 4581148 4581313 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 4583780 4583862 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 4586338 4586380 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (972 nt):
ATGAACTCCAAATGTCATTGTGTCATATTGAATGATGGTAACTTCATTCCAGTGCTGGGTTTTGGTACTG
CTCTTCCTCTAGAGTGTCCCAAGAGTAAAGCTAAGGAGCTCACCAAAATAGCTATAGATGCTGGTTTCCA
TCACTTTGATTCTGCTTCTGTCTATAATACTGAAGATCATGTAGGAGAGGCCATCAGAAGCAAGATTGCT
GATGGCACTGTAAGGAGAGAAGATATATTTTACACCTCAAAGGTTTGGTGTACTAGCCTTCACCCAGAAC
TTGTGAGAGCTTCCTTGGAACGGTCACTGCAAAAACTTCAGTTCGACTATGTGGACCTGTATCTCATTCA
TTACCCAATGGCCCTGAAACCAGGAGAAGAAAATTTTCCAGTAGATGAACATGGAAAATTAATATTTGAC
AGAGTGGACCTCTGTGCCACCTGGGAGGCCATGGAGAAGTGTAAGGATGCAGGACTAACCAAGTCCATTG
GGGTGTCTAACTTTAACTATAGACAGTTGGAGATGATTCTGAATAAGCCTGGGCTCAAGTACAAGCCGGT
ATGCAACCAGGTAGAATGCCATCCTTATCTCAACCAAATGAAACTTCTGGATTTCTGCAAATCAAAAGAT
ATTGTATTGGTTGCCTATGGTGTTCTAGGAACACAACGATATGGAGGATGGGTAGACCAGAATTCCCCTG
TTCTCTTGGATGAACCAGTTCTTGGTTCCATGGCAAAAAAATATAATCGAACTCCAGCCTTGATTGCCCT
TCGCTACCAGTTACAGCGTGGGATTGTGGTCCTCAACACCAGTCTCAAAGAGGAGCGGATCAAAGAGAAC
ATGCAGGTTTTTGAATTCCAGCTGAGTTCAGAGGATATGAAAGTTCTTGATGGCCTGAACAGAAATATGC
GATACATACCTGCTGCCATTTTCAAGGGCCACCCTAATTGGCCATTTTTGGATGAATACTAG

Translation (323 aa):
MNSKCHCVILNDGNFIPVLGFGTALPLECPKSKAKELTKIAIDAGFHHFDSASVYNTEDHVGEAIRSKIA
DGTVRREDIFYTSKVWCTSLHPELVRASLERSLQKLQFDYVDLYLIHYPMALKPGEENFPVDEHGKLIFD
RVDLCATWEAMEKCKDAGLTKSIGVSNFNYRQLEMILNKPGLKYKPVCNQVECHPYLNQMKLLDFCKSKD
IVLVAYGVLGTQRYGGWVDQNSPVLLDEPVLGSMAKKYNRTPALIALRYQLQRGIVVLNTSLKEERIKEN
MQVFEFQLSSEDMKVLDGLNRNMRYIPAAIFKGHPNWPFLDEY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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