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Report for CCDS26630.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26630.1 Public Mus musculus 13 Ndufs6 23 108 98 CCDS HistoryNCBI Gene:407785Re-query CCDS DB by CCDS ID:26630.1Re-query CCDS DB by GeneID:407785See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26630.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000022097.5 ENSMUSP00000022097.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000022097.5Link to Ensembl Protein Viewer:ENSMUSP00000022097.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000022097Re-query CCDS DB by Protein ID:ENSMUSP00000022097
Original member NCBI NM_010888.2 NP_035018.1 Updated not alive Link to Nucleotide Sequence:NM_010888.2Link to Protein Sequence:NP_035018.1Re-query CCDS DB by Nucleotide ID:NM_010888Re-query CCDS DB by Protein ID:NP_035018
Current member NCBI NM_010888.3 NP_035018.1 Accepted alive Link to Nucleotide Sequence:NM_010888.3Link to Protein Sequence:NP_035018.1Re-query CCDS DB by Nucleotide ID:NM_010888Re-query CCDS DB by Protein ID:NP_035018Link to BLAST:NP_035018.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_035018.1 116 P52503 116 100% 0 0

Chromosomal Locations for CCDS 26630.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 73319995 73320060 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 73320294 73320416 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 73327416 73327469 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 73328339 73328446 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (351 nt):
ATGGCGGCGGTGCTGACCTTCCGCCGGCTGTTGACTCTCCCCAGGGCTGCACGGGGTTTCGGGGTTCAAG
TGTCGCCGAGCGGGGAAAAGATCACGCATACCGGCCAGGTGTATGATGAAAAAGACTACAGGAGGGTTCG
TTTTGTAGATCGTCAGAAAGAGGTGAATGAGAACTTTGCCATTGATTTGATAGCACAACAGCCTGTGAAT
GAGGTGGAGCACCGCATCATAGCCTGCGATGGAGGCGGTGGTGCCCTGGGCCACCCCAAGGTGTACATAA
ACTTGGACAAAGAAACAAAAACGGGGACATGTGGCTACTGCGGCCTGCAGTTCAAGCAGCACCATCACTA
G

Translation (116 aa):
MAAVLTFRRLLTLPRAARGFGVQVSPSGEKITHTGQVYDEKDYRRVRFVDRQKEVNENFAIDLIAQQPVN
EVEHRIIACDGGGGALGHPKVYINLDKETKTGTCGYCGLQFKQHHH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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