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Report for CCDS26678.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26678.1 Public Mus musculus 13 Acot12 23 108 98 CCDS HistoryNCBI Gene:74156Re-query CCDS DB by CCDS ID:26678.1Re-query CCDS DB by GeneID:74156See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26678.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000022120.4 ENSMUSP00000022120.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000022120.4Link to Ensembl Protein Viewer:ENSMUSP00000022120.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000022120Re-query CCDS DB by Protein ID:ENSMUSP00000022120
Original member NCBI NM_028790.3 NP_083066.1 Updated not alive Link to Nucleotide Sequence:NM_028790.3Link to Protein Sequence:NP_083066.1Re-query CCDS DB by Nucleotide ID:NM_028790Re-query CCDS DB by Protein ID:NP_083066
Current member NCBI NM_028790.4 NP_083066.1 Accepted alive Link to Nucleotide Sequence:NM_028790.4Link to Protein Sequence:NP_083066.1Re-query CCDS DB by Nucleotide ID:NM_028790Re-query CCDS DB by Protein ID:NP_083066Link to BLAST:NP_083066.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_083066.1 556 Q9DBK0 556 100% 0 0

Chromosomal Locations for CCDS 26678.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 91741531 91741660 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 91750188 91750257 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 91757523 91757583 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 91759962 91760063 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 91762921 91763056 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 91770089 91770245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 91770844 91770963 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 91771724 91771874 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 91772425 91772480 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 91772760 91772823 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 91774833 91774916 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 91781187 91781320 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 91782900 91783028 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 91784281 91784407 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 91784631 91784780 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1671 nt):
ATGGAGTCGATGGTGGCGCCGGGTGAGGTGCTCATGAGCCAGGCCATCCAGCCGGCTCATGCCGACTCCC
GCGGCGAGCTGAGCGCAGGGCAGCTGCTCAAGTGGATGGACACCACCGCTTGCCTGGCGGCCGAAAAGCA
TGCTGGGATTTCCTGTGTCACAGCCTCCATGGATGACATTCTGTTTGAGGACACAGCGAGAATTGGACAA
ATTATTACCATCAGAGCAAAAGTGACTAGGGCGTTCAGCACAAGCATGGAGATCAGTATCAAGGTCATAG
TCCAGGACAAGTTCACGGGCATCCAGAAGCTCCTCTGCGTGGCTTTCTCTACGTTTGTAGCTAAACCAGT
TGGCAAAGAAAAGGTTCACTTAAAACCTGTCCTGCTTCAAACAGAGCAAGAACAAGTGGAGCACAATCTG
GCTTCAGAGAGAAGGAAAGTCCGACTGCAGCATGAGAACACCTTCAACAACATTATGAAGGAGAGCAGCA
GGTTCAGCGATTCCATTTGTAATGAAGAAGAAGGAACGGCCACCACCATGGGCACCTCTGTCCAGAGCAT
CGAGCTTGTCCTTCCGCCCCACGCAAACCATCACGGAAACACATTTGGTGGCCAGATCATGGCATGGATG
GAGACAGTCGCCACCATTTCTGCAAGCCGCCTGTGTCATGGGCATCCCTTTCTGAAGTCTGTGGATATGT
TTAAATTCCGGGGACCGTCCACAGTTGGAGACCGCCTTGTCTTCAGTGCCATAGTCAACAACACCTTTCA
GAACAGTGTGGAAGTCGGAGTGCGTGTTGAGGCCTTTGACTGTCAGGAGTGGGCCGAGGGCCAAGGCCGC
CACATCAACAGCGCTTTTCTCATTTACAATGCTGTTGATGACCAGGAGAAACTCATCACCTTTCCCAGAA
TCCAACCCATTTCAAAGGACGATTTTCGCCGTTACCAGGGAGCCATCGCACGGAGGAGAATTCGCCTAGG
CAGGAAATATGTTATTTCCCACAAGAAAGAAGTTCCACTCAGTGCACAGTGGGATATAAGCAAAAAGGGA
TCCCTAAGTAACACCAATGTGGAAGCTCTCAAAAATCTGGCATCCAAAAGCGGTTGGGAGATTACCACCA
CCTTGGAGAAGATAAAAATATATACCCTGGAGGAGCAAGATGCCATATCTGTTAAGGTTGAAAAGCTTGT
GGGCAGTCCAGCCCACATAGCTTATCATCTCTTGTCTGACCTCACAAAGCGACCTTTATGGGACCCCCAT
TACATATCTTGTGAAGTTATAGACCAGGTGAGCGAGGACGATCAGATATATTACATCACTTGCTCGGTGG
TAAATGGAGACAAACCCAAGGACTTTGTGGTGCTTGTGTCACGAAGAAAGCCCCTCAAAGACAACAACAC
CTACACCGTGGCACTAAGGTCAGTTGTGCTGCCGTCTGTCCCGTCATCTCCACAGTACATCAGAAGTGAG
GTCATTTGTGCTGGGTTTCTCATCCAGGCTGTCGACAGCAATTCGTGCACCGTAACGTACCTGAACCAGA
TGTCAGACAGCATCCTCCCTTACTTTGCTGGCAATATTGGTGGCTGGTCAAAATCCATTGAGGAAGCTGC
AGCCTCTTGTATAAAATTCATAGAGAATGCTACTCCTGATGGACTTAAAAGTGTGTTATAA

Translation (556 aa):
MESMVAPGEVLMSQAIQPAHADSRGELSAGQLLKWMDTTACLAAEKHAGISCVTASMDDILFEDTARIGQ
IITIRAKVTRAFSTSMEISIKVIVQDKFTGIQKLLCVAFSTFVAKPVGKEKVHLKPVLLQTEQEQVEHNL
ASERRKVRLQHENTFNNIMKESSRFSDSICNEEEGTATTMGTSVQSIELVLPPHANHHGNTFGGQIMAWM
ETVATISASRLCHGHPFLKSVDMFKFRGPSTVGDRLVFSAIVNNTFQNSVEVGVRVEAFDCQEWAEGQGR
HINSAFLIYNAVDDQEKLITFPRIQPISKDDFRRYQGAIARRRIRLGRKYVISHKKEVPLSAQWDISKKG
SLSNTNVEALKNLASKSGWEITTTLEKIKIYTLEEQDAISVKVEKLVGSPAHIAYHLLSDLTKRPLWDPH
YISCEVIDQVSEDDQIYYITCSVVNGDKPKDFVVLVSRRKPLKDNNTYTVALRSVVLPSVPSSPQYIRSE
VICAGFLIQAVDSNSCTVTYLNQMSDSILPYFAGNIGGWSKSIEEAAASCIKFIENATPDGLKSVL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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