CCDS Report for Consensus CDS

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Report for CCDS26690.1 (current version)

CCDS	Status	Species	Chrom.	Gene	CCDS Release	NCBI Annotation Release	Ensembl Annotation Release	Links
26690.1	Public	Mus musculus	13	Dmgdh	23	108	98

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26690.1

Original	Current	Source	Nucleotide ID	Protein ID	Status in CCDS	Seq. Status	Links
		EBI	ENSMUST00000048001.7	ENSMUSP00000039663.6	Accepted	alive
		NCBI	NM_028772.3	NP_083048.1	Accepted	alive

RefSeq	Length	Related UniProtKB/SwissProt	Length	Identity	Gaps	Mismatches
NP_083048.1	869	Q9DBT9	869	100%	0	0

Chromosomal Locations for CCDS 26690.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 13 (NC_000079.6)

Genome Browser links:

Chromosome	Start	Stop
13	93674447	93674532
13	93677035	93677203
13	93686928	93687026
13	93688525	93688689
13	93691872	93692076
13	93703787	93704035
13	93706631	93706829
13	93708673	93708842
13	93709182	93709335
13	93711293	93711458
13	93712046	93712176
13	93715458	93715675
13	93717555	93717712
13	93720559	93720618
13	93744293	93744427
13	93752220	93752465

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.

Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2610 nt):
ATGCTCCGCCCGGGCGCGCTGCGGCTGCGGGGCCTCGCGCTGCGGGGCTCCCCCAGGCGCCCAAGCTCCG CTGGCCTCCGGGAAGGACAGGAAAGCCCAGCCTCACCCCCAGAATGGAAGGACAGAGCAGAGACTGTGAT CATTGGAGGCGGCTGTGTGGGCGTGAGCCTGGCTTATCATCTGGCCAAGGCTGGGATGAGAGATGTGGTC CTGATGGAGAAGTCGGAGCTCACCGCTGGCTCTACCTGGCACGCAGCAGGTTTAACAACTTACTTTCACC CCGGGATAAACTTGAAGAAAATACATTATGACAGCATCAAACTTTACGAGAGGCTGGAAGAAGAAACCGG ACAGGTGGTGGGATTCCATCAACCAGGTAGTATCAGGCTTGCTACAACTCCTGTAAGGGTGGACGAATTT AAATACCAAATGACGCGAACCAACTGGCACGCCACGGAACAGTATATTATTGAGCCTGAAAAAATCCACG AGCTGTTCCCTTTACTCAACATGAACAAGATTTTAGCCGGACTGTATAACCCAGGAGATGGCCACATTGA TCCTTATTCTCTGACGATGGCCCTGGCTGCTGGTGCTAGGAAATATGGGGCCCTTCTAAAGTATCCAGCA CCAGTGACATCTCTGAAGCCCAGGCCAGATGGGACATGGGATGTGGAGACTCCACAAGGATCTGTGAGAG CAAATAGGATTGTGAATGCTGCAGGATTTTGGGCTCGTGAAGTGGGTAAAATGATTGGACTAGACCACCC CCTCATCCCCGTCCAACATCAATATGTCGTCACATCAACAATCCCAGAAGTGAAGGCTTTGAAACGAGAG CTCCCCGTCCTCCGCGACCTGGAAGGATCCTACTACCTCCGACAGGAAAGGGATGGGCTTTTGTTTGGTC CCTATGAAAGTCAGGAGAAGATGAAACTCCAAGCCTCCTGGGTCACTCACGGAGTCCCTCCAGGCTTTGG AAAGGAGCTTTTTGAGTCTGATTTAGATCGAATCTCAGACCACCTGGAAGCTGCCATGGAGATGATTCCT GTCTTGAAGAAGGCGGACATCATCAATGTCGTCAATGGCCCTATCACCTACTCTCCCGACATTCTGCCTA TGGTGGGGCCCCATCAGGGGGTCAGAAACTACTGGGTGGCGACTGGCTTTGGATACGGCATAATCCATGC TGGTGGGGTAGGCAAGTTCCTCAGTGACTGGATCCTGCATGGAGAACCTCCTTTTGACCTGATAGAACTG GATCCCAATCGCTACGGCAAATGGACGACGACACAGTACACCGAGGCCAAAGCCCGAGAATCATATGGGT TCAACAACATTGTTGGTTATCCTAAAGAAGAGCGGTTTGCTGGGAGGCCAACCCAGAGAGTCAGTGGACT TTACAAAACCCTGAAGTCCAAGTGTTCCATGGGCTTCCATGCAGGCTGGGAACAGCCACATTGGTTCTAT AAGCCTGGCCAGGACACTCAGTATAGGCCAAGTTTCCGCCGCACAAACTGGTTTGAGCCGGTGGGCTCTG AGTACAAACAGGTTATGCAAAGAGTTGGTGTGATTGACCTGTCTCCATTTGGCAAGTTCAACATCAAAGG CCGAGATTCTACCCAACTTCTGGACCATCTCTTTGCTAATGTCATTCCCAAGGTGGGTTTTACAAACATA AGTCACATGTTGACGCCCAGAGGTCGGGTGTATGCTGAGCTGACTGTTTCCCAGCAGTCTCCTGGGGAGT TCCTGTTGATCACTGGCTCCGGGTCGGAGCTTCACGACCTTAGATGGATTGAAGAAGCAGCCTTCAGAGG TGGATATGATGTGGAAATTCAAAACATAACCGATGAGTTTGGGGTCCTGGGAGTTGCAGGGCCATATGCA AGAAGAGTCCTTCAGAAGCTGACCTCAGAAGATCTCAGCGATGATGCATTCAAGTTTCTTCAAACCAAAT CTTTTAACATCTCAGACATTCCAGTCACTGCTATCAGAATCTCCTATACTGGTGAGCTGGGCTGGGAGCT GTACCACAGACGAGAAGATTCTGCGACGCTTTATGAGCGCATCATGAGTGCCGGCCAGGAGGAGGGCATC GGCGACTTTGGAACTTACGCCCTGAACGCTTTGAGACTGGAGAAGGCTTTCCGAGCCTGGGGCTCCGAGA TGAACTGTGACACAAACCCCTTGGAAGCTGGGCTGGAATATTTCGTGAAGCTGAATAAGCCCGCTGACTT CATAGGGAAGCAGGCCCTGAAGCAGATTAAAACCGAGGGGCTAAAGCGGAGACTGGTCTGCCTCACCGTG GCAACGGACGATGTGGATCCAGAGGGAAATGAAAGCATTTGGTACAAGGGCAAGGTGGTTGGCAACACAA CATCTGGAAGCTACAGTTACAGCATTCAGAAGAGCCTGGCTTTTGCTTATGTCCCAGTCCAGCTCAGTGA AGTGGGACAGCAAGTGGAGGTTGAACTACTGGGTAAAAATTACCCAGCCACCATTATACAAGAACCCCTG GTACTCACGGAGCCTGCCCGAGCCAGGCTTCAGAAAGACGGTAAAAAGACAAATCTTGAGAAAGGCCCAT CCCGGACAACCAAGTTGTAG
Translation (869 aa):
MLRPGALRLRGLALRGSPRRPSSAGLREGQESPASPPEWKDRAETVIIGGGCVGVSLAYHLAKAGMRDVV LMEKSELTAGSTWHAAGLTTYFHPGINLKKIHYDSIKLYERLEEETGQVVGFHQPGSIRLATTPVRVDEF KYQMTRTNWHATEQYIIEPEKIHELFPLLNMNKILAGLYNPGDGHIDPYSLTMALAAGARKYGALLKYPA PVTSLKPRPDGTWDVETPQGSVRANRIVNAAGFWAREVGKMIGLDHPLIPVQHQYVVTSTIPEVKALKRE LPVLRDLEGSYYLRQERDGLLFGPYESQEKMKLQASWVTHGVPPGFGKELFESDLDRISDHLEAAMEMIP VLKKADIINVVNGPITYSPDILPMVGPHQGVRNYWVATGFGYGIIHAGGVGKFLSDWILHGEPPFDLIEL DPNRYGKWTTTQYTEAKARESYGFNNIVGYPKEERFAGRPTQRVSGLYKTLKSKCSMGFHAGWEQPHWFY KPGQDTQYRPSFRRTNWFEPVGSEYKQVMQRVGVIDLSPFGKFNIKGRDSTQLLDHLFANVIPKVGFTNI SHMLTPRGRVYAELTVSQQSPGEFLLITGSGSELHDLRWIEEAAFRGGYDVEIQNITDEFGVLGVAGPYA RRVLQKLTSEDLSDDAFKFLQTKSFNISDIPVTAIRISYTGELGWELYHRREDSATLYERIMSAGQEEGI GDFGTYALNALRLEKAFRAWGSEMNCDTNPLEAGLEYFVKLNKPADFIGKQALKQIKTEGLKRRLVCLTV ATDDVDPEGNESIWYKGKVVGNTTSGSYSYSIQKSLAFAYVPVQLSEVGQQVEVELLGKNYPATIIQEPL VLTEPARARLQKDGKKTNLEKGPSRTTKL

	Links Key
	Links to:	History report BLAST report Entrez Gene Nucleotide report Protein report
	Re-query CCDS DB by:	CCDS ID Gene ID Nucleotide ID Protein ID
	Genome Browser Links:	Ensembl Genome Browser NCBI Sequence Viewer UCSC Genome Browser VEGA Genome Browser

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