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Report for CCDS26868.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26868.1 Public Mus musculus 14 Comtd1 23 108 98 CCDS HistoryNCBI Gene:69156Re-query CCDS DB by CCDS ID:26868.1Re-query CCDS DB by GeneID:69156See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 26868.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000124549.8 ENSMUSP00000119330.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000124549.8Link to Ensembl Protein Viewer:ENSMUSP00000119330.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000124549Re-query CCDS DB by Protein ID:ENSMUSP00000119330
Original member Current member NCBI NM_026965.2 NP_081241.1 Accepted alive Link to Nucleotide Sequence:NM_026965.2Link to Protein Sequence:NP_081241.1Re-query CCDS DB by Nucleotide ID:NM_026965Re-query CCDS DB by Protein ID:NP_081241Link to BLAST:NP_081241.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_081241.1 262 Q8BIG7 262 100% 0 0

Chromosomal Locations for CCDS 26868.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 21847275 21847427 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21847614 21847747 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21847873 21847927 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21848002 21848120 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21848210 21848315 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21848541 21848668 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21848779 21848872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (789 nt):
ATGGCTCAGCCCGTCCCTCGGCTATCTATCCCAGCCGCACTGGCCCTGGGCTCGGCCGCGCTGGGCGCCG
CCTTCGCTACTGGTCTCTTGCTGGGGAAACGGTGGCCTCCATGGGGGTCCAGGCGGCAAGAGCGCCTGCT
GCCACCTGAGGACAATCCCCTGTGGCAGTATCTGCTGAGCCGCTCCATGAGAGAGCACCCGGCGCTGCGG
AGCCTGCGACTGCTGACCCTGGAGCAGCCGCAGGGGGATTCCATGATGACCTGTGAACAGGCCCAGCTTC
TGGCCAACCTGGCGCGGCTCATTAAGGCCAAGAAAGCTCTGGATCTGGGTACTTTCACGGGCTACTCGGC
CCTGGCCCTAGCCTTGGCGCTTCCGGAGGCTGGCCGCGTGGTGACCTGCGAGGTTGACGCAGAGCCCCCG
AAGCTGGGACGGCCCATGTGGAAGCAGGCAGAAGTGGAGCAGAAGATCGACCTTCGGCTGCAGCCCGCCC
TGCAGACATTGGATGAGCTCCTAGCGGCGGGCGAGGCCGGAACCTTCGACATAGCCGTGGTGGACGCGGA
CAAAGAGAACTGTACCGCCTACTACGAGCGCTGTCTGCAGCTCCTACGTCCCGGAGGCGTGCTCGCTGTA
CTCAGAGTCCTGTGGCGCGGAGAAGTGCTGCAGCCTCAGCCCAGGAACAAGACTGTTGAATGTGTGCGGA
ACCTGAACGAACGCATCCTGAGGGACGCCAGGGTCTACATCAGCCTCCTGCCCCTGGATGATGGCCTCTC
CTTGGCCTTTAAGATCTAG

Translation (262 aa):
MAQPVPRLSIPAALALGSAALGAAFATGLLLGKRWPPWGSRRQERLLPPEDNPLWQYLLSRSMREHPALR
SLRLLTLEQPQGDSMMTCEQAQLLANLARLIKAKKALDLGTFTGYSALALALALPEAGRVVTCEVDAEPP
KLGRPMWKQAEVEQKIDLRLQPALQTLDELLAAGEAGTFDIAVVDADKENCTAYYERCLQLLRPGGVLAV
LRVLWRGEVLQPQPRNKTVECVRNLNERILRDARVYISLLPLDDGLSLAFKI


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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