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Report for CCDS27240.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27240.1 Public Mus musculus 14 Entpd4 23 108 98 CCDS HistoryNCBI Gene:67464Re-query CCDS DB by CCDS ID:27240.1Re-query CCDS DB by GeneID:67464See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 27240.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000064831.5 ENSMUSP00000065046.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000064831.5Link to Ensembl Protein Viewer:ENSMUSP00000065046.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000064831Re-query CCDS DB by Protein ID:ENSMUSP00000065046
Original member Current member EBI ENSMUST00000184973.7 ENSMUSP00000138944.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000184973.7Link to Ensembl Protein Viewer:ENSMUSP00000138944.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000184973Re-query CCDS DB by Protein ID:ENSMUSP00000138944
Original member Current member NCBI NM_026174.3 NP_080450.1 Accepted alive Link to Nucleotide Sequence:NM_026174.3Link to Protein Sequence:NP_080450.1Re-query CCDS DB by Nucleotide ID:NM_026174Re-query CCDS DB by Protein ID:NP_080450Link to BLAST:NP_080450.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_080450.1 613 Q9DBT4-1 613 100% 0 0

Chromosomal Locations for CCDS 27240.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 69347587 69347594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 69349073 69349270 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 69350703 69350908 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 69354402 69354552 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 69355394 69355497 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 69356713 69356772 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 69356995 69357149 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 69358822 69358988 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 69361639 69361963 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 69363568 69363653 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 69364323 69364484 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 69365520 69365739 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1842 nt):
ATGGGGAGGATTGGCATTTCCTGTCTCTTTCCTGCCTCTTGGCATTTTAGCATCTCTCCAGTGGGCTGTC
CTCGAATTCTGAACACCAATTTACGACAAATCGTTGTCATTAGCATCCTGGCTGCAGCTGTCTCCCTTTT
ATACTTCTCTGTTGTCATAATCCGCAGCAAGTATGGGTGGCTGTCAAAGGACAAGAAATTTCAAAGGTAC
TTGGCCCGAGTCACAGACGTTGAGGCCACAGACACCAACAACCCCAGCGTGAACTATGGCATCGTGGTGG
ACTGCGGCAGCAGTGGGTCTCGGATATTTGTCTACTGCTGGCCTCGGCACAATGGCAACCCTCACGATCT
GCTGGACATCAGACAGATGAGGGACAAAAACCGGAAGCCAGTGGTGATGAAGATTAAGCCCGGCATCTCA
GAGTTTGCTACCTCTCCAGAAAAAGTCAGCGACTACATTTCTCCGCTTCTGAGCTTTGCTGCAGAACATG
TGCCTCGGGCAAAACACAAAGAGACACCTCTCTACATTCTCTGCACAGCTGGAATGAGAGTCCTTCCTGA
AAGCCAGCAGAAAGCCATCCTAGAGGACCTCCTGACCGACATCCCTGTGCACTATGATTTCCTGTTTTCT
GACTCCCATGCCGAAGTCATCTCAGGAAAACAAGAAGGTGTGTATGCTTGGATCGGCATTAATTTTGTCC
TCGGACGGTTTGAGCATATTGAGGAGGATGACGAGGCGGTTGTGGAAGTCAACATTCCGGGCAGCGAGAG
CAGCGAGGCCATCGTGCGGAAAAGGACAGCTGGTGTCCTCGACATGGGAGGCGTGTCTACCCAGATAGCG
TACGAAGTCCCCCAAACTGTAAGCTTTGCCTCCTCGCAGCAGGAAGAAGTAGCTAAAAACCTGTTAGCTG
AATTCAACCTGGGGTGCGATGTCCACCAGACTGAGCATGTGTACCGCGTCTACGTGGCCACGTTTCTTGG
GTTTGGTGGTAATGCTGCCCGGCAGAGATATGAAGACCGACTATTTGCCAGCACAGTTCAGAAAAACAGG
CTCCTGGGTAAACAGACTGGTCTGACTCCTGATGCTCCACTACTGGATCCCTGCTTGCCTCTGGACATTA
AAGATGAGATCCAGCAAAACGGGCAGACCCTGTACCTTCAGGGGACAGGAGACTTTGACCTGTGTCGAGA
GACCCTGCAGCCTTTCATGAACAAAACCAATGAGACCCAGACTTCCCTCAATGGCGTCTACCAGCCTCCA
ATCCACTTCCAGAACAGTGAATTCTACGGCTTCTCTGAGTTCTACTACTGCACCGAGGATGTCTTGCGAA
TGGGGGGAGACTACAATGCTGCTAGATTCACTCAAGCTGCCAAGGATTACTGTGCAACAAAGTGGTCGAT
CCTGCGGGAACGCTTTGACCGAGGACTCTATGCCTCTCATGCCGACCTCCATCGACTGAAGTATCAGTGT
TTCAAATCAGCCTGGATGTTCGAGGTGTTCCACAAAGGCTTCTCCTTTCCTGTCACCTACAAAAACCTGA
AGACGGCCTTGCAGGTGTATGACAAGGAAGTACAGTGGACCCTGGGGGCCATCCTTTACCGGACCCGCTT
CCTGCCCTTGAGAGACATCCGGCAGGAGGTGTTCCGAGCTGGCCACGCGCACTGGCGGGGCGTGTCCTTC
GTCTACAACCACTATCTGTTCTCCGGTTGCTTCCTGGTCGTCCTTCTGTCCATCCTTCTCTACCTGCTGC
GGCTGCGGCGCATCCACCGCAGGGCGCCCCGCACTGGCTCTCTGTGGATGGAGGAAGGCCTGCCCTCCCA
GAAGGGCCCTGGGCCCTTGTGA

Translation (613 aa):
MGRIGISCLFPASWHFSISPVGCPRILNTNLRQIVVISILAAAVSLLYFSVVIIRSKYGWLSKDKKFQRY
LARVTDVEATDTNNPSVNYGIVVDCGSSGSRIFVYCWPRHNGNPHDLLDIRQMRDKNRKPVVMKIKPGIS
EFATSPEKVSDYISPLLSFAAEHVPRAKHKETPLYILCTAGMRVLPESQQKAILEDLLTDIPVHYDFLFS
DSHAEVISGKQEGVYAWIGINFVLGRFEHIEEDDEAVVEVNIPGSESSEAIVRKRTAGVLDMGGVSTQIA
YEVPQTVSFASSQQEEVAKNLLAEFNLGCDVHQTEHVYRVYVATFLGFGGNAARQRYEDRLFASTVQKNR
LLGKQTGLTPDAPLLDPCLPLDIKDEIQQNGQTLYLQGTGDFDLCRETLQPFMNKTNETQTSLNGVYQPP
IHFQNSEFYGFSEFYYCTEDVLRMGGDYNAARFTQAAKDYCATKWSILRERFDRGLYASHADLHRLKYQC
FKSAWMFEVFHKGFSFPVTYKNLKTALQVYDKEVQWTLGAILYRTRFLPLRDIRQEVFRAGHAHWRGVSF
VYNHYLFSGCFLVVLLSILLYLLRLRRIHRRAPRTGSLWMEEGLPSQKGPGPL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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