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Report for CCDS27586.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27586.1 Public Mus musculus 15 Gpt 23 108 98 CCDS HistoryNCBI Gene:76282Re-query CCDS DB by CCDS ID:27586.1Re-query CCDS DB by GeneID:76282See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 27586.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000023203.5 ENSMUSP00000023203.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000023203.5Link to Ensembl Protein Viewer:ENSMUSP00000023203.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000023203Re-query CCDS DB by Protein ID:ENSMUSP00000023203
Original member Current member EBI ENSMUST00000229679.1 ENSMUSP00000155553.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000229679.1Link to Ensembl Protein Viewer:ENSMUSP00000155553.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000229679Re-query CCDS DB by Protein ID:ENSMUSP00000155553
Original member Current member NCBI NM_182805.3 NP_877957.1 Accepted alive Link to Nucleotide Sequence:NM_182805.3Link to Protein Sequence:NP_877957.1Re-query CCDS DB by Nucleotide ID:NM_182805Re-query CCDS DB by Protein ID:NP_877957Link to BLAST:NP_877957.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_877957.1 496 Q8QZR5 496 100% 0 0

Chromosomal Locations for CCDS 27586.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 76696858 76697019 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76697159 76697248 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76697322 76697430 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76697542 76697675 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76697840 76698083 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76698303 76698382 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76698456 76698592 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76698715 76698889 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76698996 76699151 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76699236 76699348 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76699420 76699510 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1491 nt):
ATGGCCTCACAAAGGAATGACCGGATCCAGGCTTCAAGGAATGGACTGAAGGGGAAGGTGCTAACTCTGG
ATACCATGAACCCATGTGTGCGGAGGGTGGAGTATGCAGTCCGAGGCCCCATCGTGCAACGTGCCTTGGA
GCTGGAGCAGGAGCTGCGCCAGGGTGTGAAGAAGCCTTTTACTGAGGTTATCCGTGCCAATATTGGGGAT
GCACAAGCCATGGGGCAGAGACCCATCACCTTCTTCCGCCAGGTCCTGGCCCTCTGTGTCTACCCCAATC
TTCTGAGCAGTCCGGACTTCCCAGAGGATGCCAAGAGAAGGGCAGAACGCATCTTGCAGGCATGCGGGGG
CCACAGCCTGGGTGCCTATAGCATTAGCTCTGGAATCCAGCCGATTCGGGAGGATGTGGCGCAATATATT
GAGAGGAGAGACGGAGGCATCCCTGCAGACCCGAACAACATATTTCTGTCCACAGGGGCCAGCGATGCCA
TCGTGACCATGCTCAAGCTGCTGGTAGCCGGCGAGGGCCGTGCGCGAACCGGTGTACTCATTCCCATTCC
TCAGTACCCACTGTACTCAGCTGCGCTGGCTGAGCTGGACGCCGTGCAAGTGGACTACTACCTGGACGAA
GAGCGCGCCTGGGCTCTTGACATCGCTGAGCTGCGGCGCGCTCTGTGCCAGGCACGTGACCGCTGCTGCC
CTCGAGTACTATGCGTCATCAACCCCGGCAACCCCACGGGGCAGGTGCAGACCCGTGAATGCATCGAGGC
CGTAATCCGCTTTGCTTTCGAAGAGGGACTCTTCCTGATGGCTGATGAGGTATACCAAGACAATGTATAT
GCTGAGGGCTCTCAGTTCCATTCATTCAAGAAGGTGCTCACGGAGATGGGGCCACCATATGCCACGCAGC
AGGAGCTCGCGTCTTTCCACTCAGTCTCTAAGGGCTACATGGGCGAGTGCGGGTTTCGTGGTGGCTATGT
GGAAGTGGTAAACATGGATGCCGAGGTGCAGAAACAGATGGCGAAACTGATGAGCGTGCGGTTGTGTCCA
CCAGTGCCGGGCCAGGCTTTGATGGGCATGGTGGTCAGTCCGCCAACCCCCTCGGAGCCGTCCTTCAAGC
AGTTTCAAGCAGAGAGGCAGGAGGTGCTGGCTGAACTGGCAGCCAAGGCTAAACTCACGGAGCAGGTCTT
CAACGAGGCCCCCGGGATCCGCTGCAACCCGGTGCAGGGCGCTATGTATTCCTTCCCTCAAATTCAGCTG
CCTTTGAAAGCAGTGCAGCGTGCGCAGGACCTGGGCCTGGCCCCTGACATGTTCTTCTGTCTGTGCCTCC
TGGAAGAGACTGGCATCTGCGTTGTGCCTGGGAGTGGCTTTGGGCAGCAGGAGGGCACCTATCATTTCCG
GATGACCATTCTGCCCCCCATGGAGAAACTGCGGGTGCTGCTGGAGAAACTGAGGCACTTCCATGCTAAA
TTCACTCATGAGTACTCCTGA

Translation (496 aa):
MASQRNDRIQASRNGLKGKVLTLDTMNPCVRRVEYAVRGPIVQRALELEQELRQGVKKPFTEVIRANIGD
AQAMGQRPITFFRQVLALCVYPNLLSSPDFPEDAKRRAERILQACGGHSLGAYSISSGIQPIREDVAQYI
ERRDGGIPADPNNIFLSTGASDAIVTMLKLLVAGEGRARTGVLIPIPQYPLYSAALAELDAVQVDYYLDE
ERAWALDIAELRRALCQARDRCCPRVLCVINPGNPTGQVQTRECIEAVIRFAFEEGLFLMADEVYQDNVY
AEGSQFHSFKKVLTEMGPPYATQQELASFHSVSKGYMGECGFRGGYVEVVNMDAEVQKQMAKLMSVRLCP
PVPGQALMGMVVSPPTPSEPSFKQFQAERQEVLAELAAKAKLTEQVFNEAPGIRCNPVQGAMYSFPQIQL
PLKAVQRAQDLGLAPDMFFCLCLLEETGICVVPGSGFGQQEGTYHFRMTILPPMEKLRVLLEKLRHFHAK
FTHEYS


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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