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Report for CCDS29410.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
29410.1 Public Mus musculus 19 Ndufv1 23 108 98 CCDS HistoryNCBI Gene:17995Re-query CCDS DB by CCDS ID:29410.1Re-query CCDS DB by GeneID:17995See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 29410.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000042497.13 ENSMUSP00000042967.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000042497.13Link to Ensembl Protein Viewer:ENSMUSP00000042967.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000042497Re-query CCDS DB by Protein ID:ENSMUSP00000042967
Original member Current member NCBI NM_133666.3 NP_598427.1 Accepted alive Link to Nucleotide Sequence:NM_133666.3Link to Protein Sequence:NP_598427.1Re-query CCDS DB by Nucleotide ID:NM_133666Re-query CCDS DB by Protein ID:NP_598427Link to BLAST:NP_598427.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_598427.1 464 Q91YT0 464 100% 0 0

Chromosomal Locations for CCDS 29410.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 4007579 4007665 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 4007770 4007915 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 4008048 4008129 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 4008343 4008509 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 4008594 4008806 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 4009344 4009533 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 4009826 4010009 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 4011102 4011272 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 4011346 4011428 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 4012551 4012622 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1395 nt):
ATGCTAGCGGCACGGCATTTTCTCGGCGGGTTGGTTCCCGTGCGGGTATCTGTGCGTTTCAGCAGCGGCA
CGACAGCACCCAAGAAAACCTCATTTGGCTCACTGAAGGATGAAGACCGGATCTTTACCAACCTGTATGG
GCGCCATGACTGGAGGCTGAAAGGTGCCCTGAGACGGGGTGACTGGTACAAGACAAAGGAGATCCTGCTG
AAGGGGCCTGACTGGATCTTGGGTGAGATGAAGACATCAGGTTTACGGGGCCGTGGTGGTGCTGGCTTCC
CCACTGGCCTCAAGTGGAGCTTCATGAATAAGCCCTCAGATGGCAGGCCCAAGTATCTGGTGGTGAATGC
TGACGAGGGAGAGCCAGGCACCTGTAAGGACCGAGAGATCATGCGTCATGACCCTCACAAGCTGGTGGAA
GGCTGCCTTGTGGGAGGCCGGGCCATGGGAGCCCGGGCCGCCTATATCTACATCCGAGGGGAATTCTACA
ACGAGGCCTCCAATTTGCAGGTAGCTATCCGAGAGGCCTATGAAGCAGGTCTGATTGGCAAGAATGCTTG
TGGCTCCGACTATGATTTTGATGTGTTTGTGGTGCGTGGGGCTGGGGCCTACATCTGTGGAGAAGAGACG
GCACTTATTGAATCCATTGAAGGCAAGCAGGGAAAGCCACGCCTGAAGCCGCCCTTTCCAGCAGATGTGG
GAGTGTTTGGATGCCCCACAACTGTGGCCAATGTGGAGACAGTGGCTGTGTCCCCCACCATTTGCCGTCG
TGGGGGCACCTGGTTTGCTGGCTTTGGCCGAGAACGCAATTCAGGTACCAAATTGTTTAACATCTCTGGC
CATGTCAACCACCCCTGCACTGTGGAGGAAGAGATGTCTGTGCCACTGAAAGAGCTGATTGAGAAACATG
CTGGTGGTGTCACAGGTGGCTGGGACAACCTCCTTGCTGTGATTCCTGGTGGCTCATCTACTCCACTGAT
TCCCAAATCTGTGTGTGAGACCGTGCTAATGGACTTCGATGCACTGGTGCAGGCTCAGACAGGCCTGGGC
ACGGCTGCAGTTATTGTTATGGATCGCTCGACAGACATTGTGAAAGCCATCGCTCGTCTCATTGAGTTCT
ACAAGCATGAGAGCTGTGGCCAGTGTACCCCGTGCCGTGAGGGCGTTGACTGGATGAACAAGGTGATGGC
CCGATTTGTGAAGGGAGATGCCCGGCCAGCTGAGATTGACTCCCTGTGGGAGATCAGCAAGCAGATAGAA
GGCCACACCATTTGTGCTCTGGGTGATGGGGCTGCCTGGCCAGTACAGGGTCTGATCCGACATTTCAGGC
CAGAGCTTGAGGATCGGATGCAACGATTTGCCCAGCAGCACCGGGCCTGGCAGGCAGCCTCGTGA

Translation (464 aa):
MLAARHFLGGLVPVRVSVRFSSGTTAPKKTSFGSLKDEDRIFTNLYGRHDWRLKGALRRGDWYKTKEILL
KGPDWILGEMKTSGLRGRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIMRHDPHKLVE
GCLVGGRAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSDYDFDVFVVRGAGAYICGEET
ALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGTWFAGFGRERNSGTKLFNISG
HVNHPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGGSSTPLIPKSVCETVLMDFDALVQAQTGLG
TAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCREGVDWMNKVMARFVKGDARPAEIDSLWEISKQIE
GHTICALGDGAAWPVQGLIRHFRPELEDRMQRFAQQHRAWQAAS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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