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Report for CCDS29792.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
29792.1 Public Mus musculus 19 Cyp2c66 23 108 98 CCDS HistoryNCBI Gene:69888Re-query CCDS DB by CCDS ID:29792.1Re-query CCDS DB by GeneID:69888See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 29792.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000087234.2 ENSMUSP00000084487.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000087234.2Link to Ensembl Protein Viewer:ENSMUSP00000084487.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000087234Re-query CCDS DB by Protein ID:ENSMUSP00000084487
Original member Current member NCBI NM_001011707.1 NP_001011707.1 Accepted alive Link to Nucleotide Sequence:NM_001011707.1Link to Protein Sequence:NP_001011707.1Re-query CCDS DB by Nucleotide ID:NM_001011707Re-query CCDS DB by Protein ID:NP_001011707Link to BLAST:NP_001011707.1

Chromosomal Locations for CCDS 29792.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 39113929 39114096 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39141891 39142053 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39142275 39142424 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39163324 39163484 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39164506 39164682 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39170926 39171067 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39176538 39176725 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39183792 39183933 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39186449 39186630 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1473 nt):
ATGGTTCTAGGTGTGTTTCTGGGGCTTCTTCTCACATGTCTGCTTCTCCTTTCACTATGGAAGCAGAATT
CTCAGAGAAGAAACCTTCCTCCTGGCCCCACACCTCTTCCCATCATTGGAAATATTCTTCAGCTAGATCT
TAAGGACATCAGCAAATCTCTGAGGAATTTTTCAAAAGTCTATGGCCCTGTGTTTACTCTGTACTTGGGC
AAAAAGCCTGCTGTGGTGTTACATGGATATAAAGCTGTGAAAGAAGCCTTGATTGATCATGGGGAGGAGT
TTGCTGGAAGAGGAACCTTTCCAGTGGCTGACAAGTTTATCAGAAGATGTGGGGTTGTTTTCAGCAGTGG
GAGGACCTGGAAAGAGATGAGACGCTTCTCACTCATGACTCTGCGAAATTTTGGGATGGGGAAGAGGAGC
ATTGAGGACCGAGTTCAAGAGGAGGCTCGCTGTCTTGTGGATGAATTGAGGAAAACCAAAGGTGTACCCT
GTGATCCCACCTTCATTCTCGGCTGTGCTCCTTGCAATGTCATCTGCTCCATTGTTTTCCAGAATCGTTT
TGATTATAAAGATCAGGAATTTCTTACCTTTATAGACATCTTAAATGAAAATGTAGAGATTCTGAGTTCC
CCTTGGATTCAGGTTTGCAATAATTTTCCCGCTATCATTGATTATCTACCAGGAAGACACAGAAAATTAC
TTAAAAATTTTGATTTTGCAAAACATTACTTTTTGGCAAAAGTAATACAGCATAAAGAGTCACTGGATAT
TAACAATCCTCGGGACTTTATTGATTGTTTCCTGATCAAAATGGAGCAGGAAAAGCACAACCCAAAGACG
GAGTTTACTTGTGAGAACTTGATCTTCACAGCATCTGATCTGTTTGCTGCTGGGACAGAGACAACAAGCA
CAACCCTGAGGTACTCTCTGCTGCTCCTGCTCAAGTATCCAGAAGTCACAGCCAAAGTCCAGGCAGAGAT
CGACTGTGTGATTGGCAGACACAGGAGCCCCTGCATGCAGGACAGGCATAGCATGCCCTACACTGATGCT
GTGTTGCATGAGATCCAGAGATACATTGATCTCCTTCCCACCAGCCTTCCCCATGCCGTGACCCGTGACG
TGAAATTCAGAGAGTATCTCATTCCCAAGGGCACCACTGTCATAGCATCACTGACTTCTGTGCTATATGA
TGATAAAGAATTCCTCAACCCAGAGAGGTTTGATCCTAGTCACTTTCTGGATGAGAGTGGCAAGTTTAAG
AAAAGTGACTACTTTTTTCCTTTCTCAACAGGAAAACGGATTTGTGTGGGAGAGGGTCTGGCTCGAACAG
AATTATTTTTATTCTTGACCACCATTTTACAGAACTTTAACTTGAAATCTCCAGTTGATCTGAAAGACCT
TGATACTACTCCAGTTGCCAATGGATTTGTTTCTGTGCCACCCAAGTTCCAGATATGCTTCATTTCCATC
TAA

Translation (490 aa):
MVLGVFLGLLLTCLLLLSLWKQNSQRRNLPPGPTPLPIIGNILQLDLKDISKSLRNFSKVYGPVFTLYLG
KKPAVVLHGYKAVKEALIDHGEEFAGRGTFPVADKFIRRCGVVFSSGRTWKEMRRFSLMTLRNFGMGKRS
IEDRVQEEARCLVDELRKTKGVPCDPTFILGCAPCNVICSIVFQNRFDYKDQEFLTFIDILNENVEILSS
PWIQVCNNFPAIIDYLPGRHRKLLKNFDFAKHYFLAKVIQHKESLDINNPRDFIDCFLIKMEQEKHNPKT
EFTCENLIFTASDLFAAGTETTSTTLRYSLLLLLKYPEVTAKVQAEIDCVIGRHRSPCMQDRHSMPYTDA
VLHEIQRYIDLLPTSLPHAVTRDVKFREYLIPKGTTVIASLTSVLYDDKEFLNPERFDPSHFLDESGKFK
KSDYFFPFSTGKRICVGEGLARTELFLFLTTILQNFNLKSPVDLKDLDTTPVANGFVSVPPKFQICFISI


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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