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Report for CCDS30660.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30660.1 Public Homo sapiens 1 MECR 24 110 108 CCDS HistoryNCBI Gene:51102Re-query CCDS DB by CCDS ID:30660.1Re-query CCDS DB by GeneID:51102See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30660.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000373791.7 ENSP00000362896.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000373791.7Link to Ensembl Protein Viewer:ENSP00000362896.3Re-query CCDS DB by Nucleotide ID:ENST00000373791Re-query CCDS DB by Protein ID:ENSP00000362896
Original member Current member NCBI NM_001024732.4 NP_001019903.3 Accepted alive Link to Nucleotide Sequence:NM_001024732.4Link to Protein Sequence:NP_001019903.3Re-query CCDS DB by Nucleotide ID:NM_001024732Re-query CCDS DB by Protein ID:NP_001019903Link to BLAST:NP_001019903.3
Original member Current member NCBI NM_001349711.2 NP_001336640.1 Accepted alive Link to Nucleotide Sequence:NM_001349711.2Link to Protein Sequence:NP_001336640.1Re-query CCDS DB by Nucleotide ID:NM_001349711Re-query CCDS DB by Protein ID:NP_001336640Link to BLAST:NP_001336640.1
Original member Current member NCBI NM_001349712.2 NP_001336641.1 Accepted alive Link to Nucleotide Sequence:NM_001349712.2Link to Protein Sequence:NP_001336641.1Re-query CCDS DB by Nucleotide ID:NM_001349712Re-query CCDS DB by Protein ID:NP_001336641Link to BLAST:NP_001336641.1
Original member Current member NCBI NM_001349713.2 NP_001336642.1 Accepted alive Link to Nucleotide Sequence:NM_001349713.2Link to Protein Sequence:NP_001336642.1Re-query CCDS DB by Nucleotide ID:NM_001349713Re-query CCDS DB by Protein ID:NP_001336642Link to BLAST:NP_001336642.1
Original member Current member NCBI NM_001349714.2 NP_001336643.1 Accepted alive Link to Nucleotide Sequence:NM_001349714.2Link to Protein Sequence:NP_001336643.1Re-query CCDS DB by Nucleotide ID:NM_001349714Re-query CCDS DB by Protein ID:NP_001336643Link to BLAST:NP_001336643.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001019903.3 297 Q9BV79-2 297 100% 0 0
NP_001336640.1 297 Q9BV79-2 297 100% 0 0
NP_001336641.1 297 Q9BV79-2 297 100% 0 0
NP_001336642.1 297 Q9BV79-2 297 100% 0 0
NP_001336643.1 297 Q9BV79-2 297 100% 0 0

Chromosomal Locations for CCDS 30660.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 29194022 29194179 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 29195941 29196013 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 29196198 29196258 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 29200516 29200589 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 29201943 29202045 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 29203131 29203233 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 29206762 29206905 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 29216005 29216136 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 29216588 29216633 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (894 nt):
ATGCTGGCGGCCCCTATCAATCCATCTGACATAAATATGATCCAAGGAAACTACGGATTCCTTCCTGAAC
TGCCTGCTGTTGGAGGGAACGAAGGTGTTGCACAGGTGGTAGCGGTGGGCAGCAATGTGACCGGGCTGAA
GCCAGGAGACTGGGTGATTCCAGCAAATGCTGGTTTAGGAACCTGGCGGACCGAGGCTGTGTTCAGCGAG
GAAGCACTGATCCAAGTTCCGAGTGACATCCCTCTTCAGAGCGCTGCCACCCTGGGTGTCAATCCCTGCA
CAGCCTACAGGATGTTGATGGACTTCGAGCAACTGCAGCCAGGGGATTCTGTCATCCAGAATGCATCCAA
CAGCGGAGTGGGGCAAGCAGTCATCCAGATCGCCGCAGCCCTGGGCCTAAGAACCATCAATGTGGTCCGA
GACAGACCTGATATCCAGAAGCTGAGTGACAGACTGAAGAGTCTGGGGGCTGAGCATGTCATCACAGAAG
AGGAGCTAAGAAGGCCCGAAATGAAAAACTTCTTTAAGGACATGCCCCAGCCACGGCTTGCTCTCAACTG
TGTTGGTGGGAAAAGCTCCACAGAGCTGCTGCGGCAGTTAGCGCGTGGAGGAACCATGGTAACCTATGGG
GGGATGGCCAAGCAGCCCGTCGTAGCCTCTGTGAGCCTGCTCATTTTTAAGGATCTCAAACTTCGAGGCT
TTTGGTTGTCCCAGTGGAAGAAGGATCACAGTCCAGACCAGTTCAAGGAGCTGATCCTCACACTGTGCGA
TCTCATCCGCCGAGGCCAGCTCACAGCCCCTGCCTGCTCCCAGGTCCCGCTGCAGGACTACCAGTCTGCC
TTGGAAGCCTCCATGAAGCCCTTCATATCTTCAAAGCAGATTCTCACCATGTGA

Translation (297 aa):
MLAAPINPSDINMIQGNYGFLPELPAVGGNEGVAQVVAVGSNVTGLKPGDWVIPANAGLGTWRTEAVFSE
EALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVR
DRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPRLALNCVGGKSSTELLRQLARGGTMVTYG
GMAKQPVVASVSLLIFKDLKLRGFWLSQWKKDHSPDQFKELILTLCDLIRRGQLTAPACSQVPLQDYQSA
LEASMKPFISSKQILTM


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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