NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS3074.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3074.1 Public Homo sapiens 3 ACAD11 24 110 108 CCDS HistoryNCBI Gene:84129Re-query CCDS DB by CCDS ID:3074.1Re-query CCDS DB by GeneID:84129See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3074.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000264990.11 ENSP00000264990.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000264990.11Link to Ensembl Protein Viewer:ENSP00000264990.6Re-query CCDS DB by Nucleotide ID:ENST00000264990Re-query CCDS DB by Protein ID:ENSP00000264990
Original member Current member NCBI NM_032169.5 NP_115545.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032169.5Link to Protein Sequence:NP_115545.3Re-query CCDS DB by Nucleotide ID:NM_032169Re-query CCDS DB by Protein ID:NP_115545Link to BLAST:NP_115545.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_115545.3 780 Q709F0-1 780 100% 0 0

Chromosomal Locations for CCDS 3074.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 132558971 132559085 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 132559833 132559942 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 132561101 132561217 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 132575772 132575926 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 132576944 132577015 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 132578796 132578881 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 132579492 132579558 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 132603229 132603327 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 132605098 132605205 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 132618634 132618772 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 132619468 132619545 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 132626691 132626817 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 132628340 132628446 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 132630437 132630558 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 132631341 132631479 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 132639492 132639656 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 132641972 132642133 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 132642677 132642802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 132644797 132644896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 132659603 132659751 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2343 nt):
ATGAAGCCAGGTGCTACTGGCGAGTCCGATTTGGCCGAAGTGCTGCCCCAGCACAAGTTCGACAGCAAGT
CCCTGGAGGCCTACCTAAACCAGCACTTGTCTGGCTTTGGGGCCGAACGTGAGGCTACGCTGACCATTGC
CCAGTACAGAGCAGGAAAGTCCAATCCAACCTTTTATCTCCAGAAGGGCTTTCAAACATATGTGCTCAGG
AAAAAACCACCAGGTTCACTTCTTCCTAAAGCACATCAGATTGATAGAGAATTTAAAGTCCAGAAAGCCT
TGTTTTCAATTGGATTCCCCGTTCCCAAGCCTATACTGTACTGCAGTGATACTTCTGTCATTGGAACAGA
ATTTTACGTAATGGAACATGTGCAGGGTCGAATCTTCCGTGATTTAACAATTCCTGGACTTAGCCCAGCA
GAACGTTCAGCCATATATGTGGCCACGGTAGAAACATTGGCTCAGTTACATTCCTTGAATATACAGTCAC
TGCAGCTGGAAGGATATGGTATAGGTGCTGGGTACTGCAAAAGACAGGTATCAACCTGGACAAAGCAATA
TCAAGCTGCAGCTCATCAGGACATCCCTGCCATGCAACAGCTATCGGAGTGGCTAATGAAGAACTTGCCC
GATAATGACAATGAAGAGAATTTGATTCATGGAGATTTCAGACTAGATAACATAGTTTTCCACCCTAAAG
AGTGTCGAGTTATAGCAGTGCTGGATTGGGAGCTGTCAACCATTGGTCATCCTTTGTCAGACTTAGCTCA
TTTTTCCCTGTTCTACTTTTGGCCAAGGACAGTTCCAATGATAAATCAAGGTTCTTATAGTGAAAACTCA
GGGATACCATCAATGGAAGAACTGATTTCAATATATTGCCGCTGCAGGGGAATTAATTCTATTCTTCCTA
ACTGGAATTTCTTTCTTGCCCTTTCATATTTTAAGATGGCTGGAATAGCACAGGGAGTATATAGCAGATA
TCTTCTGGGAAATAATTCATCTGAGGATAGCTTTTTATTTGCCAATATTGTGCAACCTCTGGCAGAAACT
GGACTACAACTCTCCAAACGAACTTTCAGTACTGTACTACCACAGATTGATACTACTGGACAGTTGTTTG
TACAGACTCGGAAAGGTCAGGAAGTTCTTATTAAGGTGAAGCATTTCATGAAACAACACATTCTTCCAGC
TGAAAAGGAGGTAACTGAGTTCTATGTTCAAAATGAAAATTCAGTGGACAAGTGGGGAAAACCTTTAGTG
ATTGATAAACTCAAGGAAATGGCCAAAGTCGAGGGTCTCTGGAACTTGTTTTTGCCAGCTGTCAGCGGAC
TCAGCCACGTGGACTATGCCTTGATTGCTGAAGAAACAGGAAAATGCTTTTTTGCTCCAGATGTCTTTAA
CTGCCAAGCACCAGACACAGGGAATATGGAGGTTCTGCACCTGTATGGAAGTGAGGAACAGAAGAAACAG
TGGCTTGAGCCTCTTCTTCAAGGGAACATTACCTCTTGCTTCTGTATGACAGAACCTGATGTAGCTTCAA
GTGATGCCACGAATATTGAATGCAGCATCCAACGAGATGAAGATAGCTATGTAATTAACGGCAAAAAATG
GTGGAGCAGTGGAGCTGGGAATCCCAAGTGCAAAATTGCAATTGTTTTGGGAAGAACTCAAAATACTTCT
CTCTCCAGACACAAACAGCACAGCATGATTCTTGTTCCCATGAACACACCTGGAGTAAAAATAATAAGGC
CTTTGTCAGTTTTTGGCTACACAGATAATTTTCATGGAGGACATTTTGAGATCCATTTTAATCAAGTGCG
AGTTCCTGCCACAAATCTAATACTAGGTGAAGGTAGGGGATTTGAAATTTCCCAAGGCCGCCTTGGACCT
GGCAGAATCCACCACTGTATGAGAACAGTAGGTTTGGCGGAACGCGCTTTGCAGATCATGTGTGAGCGGG
CAACACAAAGGATAGCTTTCAAGAAGAAGTTGTATGCACATGAGGTTGTGGCTCACTGGATTGCTGAAAG
CCGCATTGCCATTGAGAAGATCCGCTTGTTGACTCTGAAAGCTGCTCACAGCATGGACACTCTGGGCAGT
GCTGGCGCTAAGAAAGAGATTGCAATGATCAAAGTGGCTGCCCCACGGGCTGTCAGCAAAATCGTTGACT
GGGCCATCCAGGTGTGCGGAGGTGCTGGTGTTTCCCAGGATTACCCTCTGGCTAACATGTATGCTATAAC
CCGAGTTTTGCGTTTAGCAGATGGACCTGACGAAGTTCATCTTTCAGCAATCGCAACAATGGAGCTGCGG
GACCAAGCCAAAAGACTGACAGCCAAGATATAA

Translation (780 aa):
MKPGATGESDLAEVLPQHKFDSKSLEAYLNQHLSGFGAEREATLTIAQYRAGKSNPTFYLQKGFQTYVLR
KKPPGSLLPKAHQIDREFKVQKALFSIGFPVPKPILYCSDTSVIGTEFYVMEHVQGRIFRDLTIPGLSPA
ERSAIYVATVETLAQLHSLNIQSLQLEGYGIGAGYCKRQVSTWTKQYQAAAHQDIPAMQQLSEWLMKNLP
DNDNEENLIHGDFRLDNIVFHPKECRVIAVLDWELSTIGHPLSDLAHFSLFYFWPRTVPMINQGSYSENS
GIPSMEELISIYCRCRGINSILPNWNFFLALSYFKMAGIAQGVYSRYLLGNNSSEDSFLFANIVQPLAET
GLQLSKRTFSTVLPQIDTTGQLFVQTRKGQEVLIKVKHFMKQHILPAEKEVTEFYVQNENSVDKWGKPLV
IDKLKEMAKVEGLWNLFLPAVSGLSHVDYALIAEETGKCFFAPDVFNCQAPDTGNMEVLHLYGSEEQKKQ
WLEPLLQGNITSCFCMTEPDVASSDATNIECSIQRDEDSYVINGKKWWSSGAGNPKCKIAIVLGRTQNTS
LSRHKQHSMILVPMNTPGVKIIRPLSVFGYTDNFHGGHFEIHFNQVRVPATNLILGEGRGFEISQGRLGP
GRIHHCMRTVGLAERALQIMCERATQRIAFKKKLYAHEVVAHWIAESRIAIEKIRLLTLKAAHSMDTLGS
AGAKKEIAMIKVAAPRAVSKIVDWAIQVCGGAGVSQDYPLANMYAITRVLRLADGPDEVHLSAIATMELR
DQAKRLTAKI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH