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Report for CCDS30778.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30778.1 Public Homo sapiens 1 PLPPR5 24 110 108 CCDS HistoryNCBI Gene:163404Re-query CCDS DB by CCDS ID:30778.1Re-query CCDS DB by GeneID:163404See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30778.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000263177.5 ENSP00000263177.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000263177.5Link to Ensembl Protein Viewer:ENSP00000263177.4Re-query CCDS DB by Nucleotide ID:ENST00000263177Re-query CCDS DB by Protein ID:ENSP00000263177
Original member Current member NCBI NM_001037317.2 NP_001032394.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001037317.2Link to Protein Sequence:NP_001032394.1Re-query CCDS DB by Nucleotide ID:NM_001037317Re-query CCDS DB by Protein ID:NP_001032394Link to BLAST:NP_001032394.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001032394.1 321 Q32ZL2-1 321 100% 0 0

Chromosomal Locations for CCDS 30778.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 98893072 98893104 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 98914786 98914920 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 98921882 98922058 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 98953070 98953320 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 98956609 98956741 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 99004435 99004671 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (966 nt):
ATGCCCCTGCTGCCCGCGGCGCTCACCAGCAGCATGCTCTATTTCCAGATGGTGATCATGGCAGGGACGG
TGATGCTGGCGTACTACTTCGAGTATACGGACACGTTCACCGTGAACGTGCAGGGCTTCTTCTGCCACGA
CAGCGCCTACCGCAAACCCTACCCGGGCCCGGAGGACAGCAGCGCCGTGCCCCCCGTGCTCCTCTACTCG
CTGGCCGCCGGGGTCCCCGTGCTCGTGATAATAGTTGGAGAAACTGCTGTCTTTTGCCTACAACTAGCCA
CAAGGGATTTTGAAAACCAGGAAAAAACTATTTTAACTGGAGACTGTTGCTATATAAACCCGCTGGTGCG
CCGAACTGTCCGATTTCTTGGAATTTATACATTTGGACTGTTTGCTACAGATATCTTTGTAAATGCTGGA
CAAGTAGTCACAGGAAATCTGGCCCCACATTTCCTTGCCCTGTGTAAGCCCAATTATACAGCACTTGGAT
GTCAGCAGTATACACAATTCATCAGTGGGGAAGAGGCCTGTACTGGCAACCCAGATCTCATCATGAGAGC
CCGAAAAACCTTTCCATCCAAAGAAGCAGCTCTCAGTGTCTATGCAGCTATGTATCTGACCATGTACATC
ACCAACACAATCAAAGCCAAGGGAACCAGACTTGCTAAGCCAGTTCTATGCTTGGGCTTAATGTGTTTGG
CATTTCTTACTGGACTCAACAGAGTAGCAGAATATCGAAATCATTGGTCAGATGTTATAGCAGGCTTTCT
GGTTGGAATATCTATAGCAGTATTTCTGGTTGTGTGCGTGGTGAATAATTTCAAAGGGAGACAAGCAGAA
AATGAGCATATACACATGGATAATCTGGCACAGATGCCAATGATCAGCATTCCTCGAGTAGAAAGTCCTT
TGGAAAAGGTAACATCTGTACAGAACCACATCACTGCCTTCGCAGAAGTCACATGA

Translation (321 aa):
MPLLPAALTSSMLYFQMVIMAGTVMLAYYFEYTDTFTVNVQGFFCHDSAYRKPYPGPEDSSAVPPVLLYS
LAAGVPVLVIIVGETAVFCLQLATRDFENQEKTILTGDCCYINPLVRRTVRFLGIYTFGLFATDIFVNAG
QVVTGNLAPHFLALCKPNYTALGCQQYTQFISGEEACTGNPDLIMRARKTFPSKEAALSVYAAMYLTMYI
TNTIKAKGTRLAKPVLCLGLMCLAFLTGLNRVAEYRNHWSDVIAGFLVGISIAVFLVVCVVNNFKGRQAE
NEHIHMDNLAQMPMISIPRVESPLEKVTSVQNHITAFAEVT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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