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Report for CCDS31152.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31152.1 Public Homo sapiens 10 OLAH 24 110 108 CCDS HistoryNCBI Gene:55301Re-query CCDS DB by CCDS ID:31152.1Re-query CCDS DB by GeneID:55301See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31152.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000378228.8 ENSP00000367473.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000378228.8Link to Ensembl Protein Viewer:ENSP00000367473.4Re-query CCDS DB by Nucleotide ID:ENST00000378228Re-query CCDS DB by Protein ID:ENSP00000367473
Original member Current member NCBI NM_001039702.3 NP_001034791.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001039702.3Link to Protein Sequence:NP_001034791.1Re-query CCDS DB by Nucleotide ID:NM_001039702Re-query CCDS DB by Protein ID:NP_001034791Link to BLAST:NP_001034791.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001034791.1 265 Q9NV23-1 265 100% 0 0

Chromosomal Locations for CCDS 31152.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 15047289 15047320 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 15049635 15049765 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 15061724 15061862 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 15064403 15064502 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 15065584 15065753 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 15071795 15071877 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 15073087 15073229 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (798 nt):
ATGGAGAGAGGAGACCAACCTAAGAGAACCAGGAATGAAAACATTTTCAACTGCTTATACAAAAACCCTG
AGGCAACTTTTAAGCTGATTTGCTTTCCCTGGATGGGAGGTGGCTCCACTCATTTTGCCAAATGGGGCCA
AGATACTCATGATTTGCTGGAAGTGCACTCCTTAAGGCTTCCTGGAAGAGAAAGCAGAGTTGAAGAACCT
CTTGAAAATGACATCTCCCAGTTAGTTGATGAAGTTGTTTGTGCTCTGCAGCCAGTCATCCAGGATAAAC
CATTTGCATTTTTTGGCCACAGTATGGGATCCTACATTGCTTTTAGGACTGCACTAGGTCTAAAAGAAAA
CAATCAACCAGAACCATTGCATTTATTTTTGTCAAGTGCAACTCCTGTACATTCAAAGGCCTGGCATCGC
ATTCCCAAAGATGATGAATTGTCAGAAGAACAAATAAGTCATTACCTTATGGAATTTGGAGGCACCCCCA
AGCATTTTGCTGAAGCCAAGGAATTTGTGAAACAATGTAGTCCCATCATAAGGGCAGATCTGAACATTGT
TAGAAGTTGCACCTCTAACGTACCATCTAAGGCTGTTCTTTCCTGTGACTTGACATGTTTTGTTGGATCT
GAAGACATAGCAAAGGACATGGAAGCCTGGAAAGATGTAACCAGTGGAAATGCTAAAATTTACCAGCTTC
CAGGGGGTCACTTTTATCTTCTGGATCCTGCGAACGAGAAATTAATCAAGAACTACATAATCAAGTGTCT
AGAAGTATCATCGATATCCAATTTTTAG

Translation (265 aa):
MERGDQPKRTRNENIFNCLYKNPEATFKLICFPWMGGGSTHFAKWGQDTHDLLEVHSLRLPGRESRVEEP
LENDISQLVDEVVCALQPVIQDKPFAFFGHSMGSYIAFRTALGLKENNQPEPLHLFLSSATPVHSKAWHR
IPKDDELSEEQISHYLMEFGGTPKHFAEAKEFVKQCSPIIRADLNIVRSCTSNVPSKAVLSCDLTCFVGS
EDIAKDMEAWKDVTSGNAKIYQLPGGHFYLLDPANEKLIKNYIIKCLEVSSISNF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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