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Report for CCDS3141.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3141.1 Public Homo sapiens 3 CP 24 110 108 CCDS HistoryNCBI Gene:1356Re-query CCDS DB by CCDS ID:3141.1Re-query CCDS DB by GeneID:1356See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3141.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000264613.11 ENSP00000264613.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000264613.11Link to Ensembl Protein Viewer:ENSP00000264613.6Re-query CCDS DB by Nucleotide ID:ENST00000264613Re-query CCDS DB by Protein ID:ENSP00000264613
Original member Current member NCBI NM_000096.4 NP_000087.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_000096.4Link to Protein Sequence:NP_000087.2Re-query CCDS DB by Nucleotide ID:NM_000096Re-query CCDS DB by Protein ID:NP_000087Link to BLAST:NP_000087.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_000087.2 1065 P00450 1065 100% 0 0

Chromosomal Locations for CCDS 3141.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 149173714 149173730 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 149176250 149176412 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 149177840 149177979 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 149178415 149178631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 149179556 149179662 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 149182005 149182133 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 149183466 149183605 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 149185239 149185446 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 149186520 149186732 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 149188052 149188202 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 149198367 149198578 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 149199712 149199864 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 149202102 149202241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 149206168 149206339 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 149207363 149207617 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 149209211 149209384 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 149210167 149210379 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 149212451 149212698 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 149221647 149221792 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3198 nt):
ATGAAGATTTTGATACTTGGTATTTTTCTGTTTTTATGTAGTACCCCAGCCTGGGCGAAAGAAAAGCATT
ATTACATTGGAATTATTGAAACGACTTGGGATTATGCCTCTGACCATGGGGAAAAGAAACTTATTTCTGT
TGACACGGAACATTCCAATATCTATCTTCAAAATGGCCCAGATAGAATTGGGAGACTATATAAGAAGGCC
CTTTATCTTCAGTACACAGATGAAACCTTTAGGACAACTATAGAAAAACCGGTCTGGCTTGGGTTTTTAG
GCCCTATTATCAAAGCTGAAACTGGAGATAAAGTTTATGTACACTTAAAAAACCTTGCCTCTAGGCCCTA
CACCTTTCATTCACATGGAATAACTTACTATAAGGAACATGAGGGGGCCATCTACCCTGATAACACCACA
GATTTTCAAAGAGCAGATGACAAAGTATATCCAGGAGAGCAGTATACATACATGTTGCTTGCCACTGAAG
AACAAAGTCCTGGGGAAGGAGATGGCAATTGTGTGACTAGGATTTACCATTCCCACATTGATGCTCCAAA
AGATATTGCCTCAGGACTCATCGGACCTTTAATAATCTGTAAAAAAGATTCTCTAGATAAAGAAAAAGAA
AAACATATTGACCGAGAATTTGTGGTGATGTTTTCTGTGGTGGATGAAAATTTCAGCTGGTACCTAGAAG
ACAACATTAAAACCTACTGCTCAGAACCAGAGAAAGTTGACAAAGACAACGAAGACTTCCAGGAGAGTAA
CAGAATGTATTCTGTGAATGGATACACTTTTGGAAGTCTCCCAGGACTCTCCATGTGTGCTGAAGACAGA
GTAAAATGGTACCTTTTTGGTATGGGTAATGAAGTTGATGTGCACGCAGCTTTCTTTCACGGGCAAGCAC
TGACTAACAAGAACTACCGTATTGACACAATCAACCTCTTTCCTGCTACCCTGTTTGATGCTTATATGGT
GGCCCAGAACCCTGGAGAATGGATGCTCAGCTGTCAGAATCTAAACCATCTGAAAGCCGGTTTGCAAGCC
TTTTTCCAGGTCCAGGAGTGTAACAAGTCTTCATCAAAGGATAATATCCGTGGGAAGCATGTTAGACACT
ACTACATTGCCGCTGAGGAAATCATCTGGAACTATGCTCCCTCTGGTATAGACATCTTCACTAAAGAAAA
CTTAACAGCACCTGGAAGTGACTCAGCGGTGTTTTTTGAACAAGGTACCACAAGAATTGGAGGCTCTTAT
AAAAAGCTGGTTTATCGTGAGTACACAGATGCCTCCTTCACAAATCGAAAGGAGAGAGGCCCTGAAGAAG
AGCATCTTGGCATCCTGGGTCCTGTCATTTGGGCAGAGGTGGGAGACACCATCAGAGTAACCTTCCATAA
CAAAGGAGCATATCCCCTCAGTATTGAGCCGATTGGGGTGAGATTCAATAAGAACAACGAGGGCACATAC
TATTCCCCAAATTACAACCCCCAGAGCAGAAGTGTGCCTCCTTCAGCCTCCCATGTGGCACCCACAGAAA
CATTCACCTATGAATGGACTGTCCCCAAAGAAGTAGGACCCACTAATGCAGATCCTGTGTGTCTAGCTAA
GATGTATTATTCTGCTGTGGAACCCACTAAAGATATATTCACTGGGCTTATTGGGCCAATGAAAATATGC
AAGAAAGGAAGTTTACATGCAAATGGGAGACAGAAAGATGTAGACAAGGAATTCTATTTGTTTCCTACAG
TATTTGATGAGAATGAGAGTTTACTCCTGGAAGATAATATTAGAATGTTTACAACTGCACCTGATCAGGT
GGATAAGGAAGATGAAGACTTTCAGGAATCTAATAAAATGCACTCCATGAATGGATTCATGTATGGGAAT
CAGCCGGGTCTCACTATGTGCAAAGGAGATTCGGTCGTGTGGTACTTATTCAGCGCCGGAAATGAGGCCG
ATGTACATGGAATATACTTTTCAGGAAACACATATCTGTGGAGAGGAGAACGGAGAGACACAGCAAACCT
CTTCCCTCAAACAAGTCTTACGCTCCACATGTGGCCTGACACAGAGGGGACTTTTAATGTTGAATGCCTT
ACAACTGATCATTACACAGGCGGCATGAAGCAAAAATATACTGTGAACCAATGCAGGCGGCAGTCTGAGG
ATTCCACCTTCTACCTGGGAGAGAGGACATACTATATCGCAGCAGTGGAGGTGGAATGGGATTATTCCCC
ACAAAGGGAGTGGGAAAAGGAGCTGCATCATTTACAAGAGCAGAATGTTTCAAATGCATTTTTAGATAAG
GGAGAGTTTTACATAGGCTCAAAGTACAAGAAAGTTGTGTATCGGCAGTATACTGATAGCACATTCCGTG
TTCCAGTGGAGAGAAAAGCTGAAGAAGAACATCTGGGAATTCTAGGTCCACAACTTCATGCAGATGTTGG
AGACAAAGTCAAAATTATCTTTAAAAACATGGCCACAAGGCCCTACTCAATACATGCCCATGGGGTACAA
ACAGAGAGTTCTACAGTTACTCCAACATTACCAGGTGAAACTCTCACTTACGTATGGAAAATCCCAGAAA
GATCTGGAGCTGGAACAGAGGATTCTGCTTGTATTCCATGGGCTTATTATTCAACTGTGGATCAAGTTAA
GGACCTCTACAGTGGATTAATTGGCCCCCTGATTGTTTGTCGAAGACCTTACTTGAAAGTATTCAATCCC
AGAAGGAAACTGGAATTTGCCCTTCTGTTTCTAGTTTTTGATGAGAATGAATCTTGGTACTTAGATGACA
ACATCAAAACATACTCTGATCACCCCGAGAAAGTAAACAAAGATGATGAGGAATTCATAGAAAGCAATAA
AATGCATGCTATTAATGGAAGAATGTTTGGAAACCTACAAGGCCTCACAATGCACGTGGGAGATGAAGTC
AACTGGTATCTGATGGGAATGGGCAATGAAATAGACTTACACACTGTACATTTTCACGGCCATAGCTTCC
AATACAAGCACAGGGGAGTTTATAGTTCTGATGTCTTTGACATTTTCCCTGGAACATACCAAACCCTAGA
AATGTTTCCAAGAACACCTGGAATTTGGTTACTCCACTGCCATGTGACCGACCACATTCATGCTGGAATG
GAAACCACTTACACCGTTCTACAAAATGAAGACACCAAATCTGGCTGA

Translation (1065 aa):
MKILILGIFLFLCSTPAWAKEKHYYIGIIETTWDYASDHGEKKLISVDTEHSNIYLQNGPDRIGRLYKKA
LYLQYTDETFRTTIEKPVWLGFLGPIIKAETGDKVYVHLKNLASRPYTFHSHGITYYKEHEGAIYPDNTT
DFQRADDKVYPGEQYTYMLLATEEQSPGEGDGNCVTRIYHSHIDAPKDIASGLIGPLIICKKDSLDKEKE
KHIDREFVVMFSVVDENFSWYLEDNIKTYCSEPEKVDKDNEDFQESNRMYSVNGYTFGSLPGLSMCAEDR
VKWYLFGMGNEVDVHAAFFHGQALTNKNYRIDTINLFPATLFDAYMVAQNPGEWMLSCQNLNHLKAGLQA
FFQVQECNKSSSKDNIRGKHVRHYYIAAEEIIWNYAPSGIDIFTKENLTAPGSDSAVFFEQGTTRIGGSY
KKLVYREYTDASFTNRKERGPEEEHLGILGPVIWAEVGDTIRVTFHNKGAYPLSIEPIGVRFNKNNEGTY
YSPNYNPQSRSVPPSASHVAPTETFTYEWTVPKEVGPTNADPVCLAKMYYSAVEPTKDIFTGLIGPMKIC
KKGSLHANGRQKDVDKEFYLFPTVFDENESLLLEDNIRMFTTAPDQVDKEDEDFQESNKMHSMNGFMYGN
QPGLTMCKGDSVVWYLFSAGNEADVHGIYFSGNTYLWRGERRDTANLFPQTSLTLHMWPDTEGTFNVECL
TTDHYTGGMKQKYTVNQCRRQSEDSTFYLGERTYYIAAVEVEWDYSPQREWEKELHHLQEQNVSNAFLDK
GEFYIGSKYKKVVYRQYTDSTFRVPVERKAEEEHLGILGPQLHADVGDKVKIIFKNMATRPYSIHAHGVQ
TESSTVTPTLPGETLTYVWKIPERSGAGTEDSACIPWAYYSTVDQVKDLYSGLIGPLIVCRRPYLKVFNP
RRKLEFALLFLVFDENESWYLDDNIKTYSDHPEKVNKDDEEFIESNKMHAINGRMFGNLQGLTMHVGDEV
NWYLMGMGNEIDLHTVHFHGHSFQYKHRGVYSSDVFDIFPGTYQTLEMFPRTPGIWLLHCHVTDHIHAGM
ETTYTVLQNEDTKSG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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