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Report for CCDS3244.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3244.1 Public Homo sapiens 3 B3GNT5 24 110 108 CCDS HistoryNCBI Gene:84002Re-query CCDS DB by CCDS ID:3244.1Re-query CCDS DB by GeneID:84002See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3244.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000326505.4 ENSP00000316173.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000326505.4Link to Ensembl Protein Viewer:ENSP00000316173.3Re-query CCDS DB by Nucleotide ID:ENST00000326505Re-query CCDS DB by Protein ID:ENSP00000316173
Original member Current member EBI ENST00000465010.1 ENSP00000417868.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000465010.1Link to Ensembl Protein Viewer:ENSP00000417868.1Re-query CCDS DB by Nucleotide ID:ENST00000465010Re-query CCDS DB by Protein ID:ENSP00000417868
Original member Current member EBI ENST00000460419.1 ENSP00000420778.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000460419.1Link to Ensembl Protein Viewer:ENSP00000420778.1Re-query CCDS DB by Nucleotide ID:ENST00000460419Re-query CCDS DB by Protein ID:ENSP00000420778
Original member Current member NCBI NM_032047.5 NP_114436.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032047.5Link to Protein Sequence:NP_114436.1Re-query CCDS DB by Nucleotide ID:NM_032047Re-query CCDS DB by Protein ID:NP_114436Link to BLAST:NP_114436.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_114436.1 378 Q9BYG0 378 100% 0 0

Chromosomal Locations for CCDS 3244.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 183269799 183270935 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1137 nt):
ATGAGAATGTTGGTTAGTGGCAGAAGAGTCAAAAAATGGCAGTTAATTATTCAGTTATTTGCTACTTGTT
TT
TTAGCGAGCCTCATGTTTTTTTGGGAACCAATCGATAATCACATTGTGAGCCATATGAAGTCATATTC
T
TACAGATACCTCATAAATAGCTATGACTTTGTGAATGATACCCTGTCTCTTAAGCACACCTCAGCGGGG
CCT
CGCTACCAATACTTGATTAACCACAAGGAAAAGTGTCAAGCTCAAGACGTCCTCCTTTTACTGTTTG
TA
AAAACTGCTCCTGAAAACTATGATCGACGTTCCGGAATTAGAAGGACGTGGGGCAATGAAAATTATGT
T
CGGTCTCAGCTGAATGCCAACATCAAAACTCTGTTTGCCTTAGGAACTCCTAATCCACTGGAGGGAGAA
GAA
CTACAAAGAAAACTGGCTTGGGAAGATCAAAGGTACAATGATATAATTCAGCAAGACTTTGTTGATT
CT
TTCTACAATCTTACTCTGAAATTACTTATGCAGTTCAGTTGGGCAAATACCTATTGTCCACATGCCAA
A
TTTCTTATGACTGCTGATGATGACATATTTATTCACATGCCAAATCTGATTGAGTACCTTCAAAGTTTA
GAA
CAAATTGGTGTTCAAGACTTTTGGATTGGTCGTGTTCATCGTGGTGCCCCTCCCATTAGAGATAAAA
GC
AGCAAATACTACGTGTCCTATGAAATGTACCAGTGGCCAGCTTACCCTGACTACACAGCCGGAGCTGC
C
TATGTAATCTCCGGTGATGTAGCTGCCAAAGTCTATGAGGCATCACAGACACTAAATTCAAGTCTTTAC
ATA
GACGATGTGTTCATGGGCCTCTGTGCCAATAAAATAGGGATAGTACCGCAGGACCATGTGTTTTTTT
CT
GGAGAGGGTAAAACTCCTTATCATCCCTGCATCTATGAAAAAATGATGACATCTCATGGACACTTAGA
A
GATCTCCAGGACCTTTGGAAGAATGCTACAGATCCTAAAGTAAAAACCATTTCCAAAGGTTTTTTTGGT
CAA
ATATACTGCAGATTAATGAAGATAATTCTCCTTTGTAAAATTAGCTATGTGGACACATACCCTTGTA
GG
GCTGCGTTTATCTAA


Translation (378 aa):
MRMLVSGRRVKKWQLIIQLFATCFLASLMFFWEPIDNHIVSHMKSYSYRYLINSYDFVNDTLSLKHTSAG
P
RYQYLINHKEKCQAQDVLLLLFVKTAPENYDRRSGIRRTWGNENYVRSQLNANIKTLFALGTPNPLEGE
E
LQRKLAWEDQRYNDIIQQDFVDSFYNLTLKLLMQFSWANTYCPHAKFLMTADDDIFIHMPNLIEYLQSL
E
QIGVQDFWIGRVHRGAPPIRDKSSKYYVSYEMYQWPAYPDYTAGAAYVISGDVAAKVYEASQTLNSSLY
I
DDVFMGLCANKIGIVPQDHVFFSGEGKTPYHPCIYEKMMTSHGHLEDLQDLWKNATDPKVKTISKGFFG
Q
IYCRLMKIILLCKISYVDTYPCRAAFI




Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
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