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Report for CCDS32558.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32558.1 Public Homo sapiens 17 ALOX15B 24 110 108 CCDS HistoryNCBI Gene:247Re-query CCDS DB by CCDS ID:32558.1Re-query CCDS DB by GeneID:247See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 32558.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000380173.6 ENSP00000369520.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000380173.6Link to Ensembl Protein Viewer:ENSP00000369520.2Re-query CCDS DB by Nucleotide ID:ENST00000380173Re-query CCDS DB by Protein ID:ENSP00000369520
Original member Current member NCBI NM_001039130.2 NP_001034219.1 Accepted alive Link to Nucleotide Sequence:NM_001039130.2Link to Protein Sequence:NP_001034219.1Re-query CCDS DB by Nucleotide ID:NM_001039130Re-query CCDS DB by Protein ID:NP_001034219Link to BLAST:NP_001034219.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001034219.1 647 O15296-4 647 100% 0 0

Chromosomal Locations for CCDS 32558.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 8039156 8039302 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 8039386 8039605 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 8039902 8039983 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 8042369 8042491 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 8042781 8042884 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 8044829 8045001 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 8045238 8045384 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 8045483 8045686 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 8046907 8047076 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 8047258 8047379 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 8047564 8047664 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 8047745 8047915 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 8048386 8048565 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1944 nt):
ATGGCCGAGTTCAGGGTCAGGGTGTCCACCGGAGAAGCCTTCGGGGCTGGCACATGGGACAAAGTGTCTG
TCAGCATCGTGGGGACCCGGGGAGAGAGCCCCCCACTGCCCCTGGACAATCTCGGCAAGGAGTTCACTGC
GGGCGCTGAGGAGGACTTCCAGGTGACGCTCCCGGAGGACGTAGGCCGAGTGCTGCTGCTGCGCGTGCAC
AAGGCGCCCCCAGTGCTGCCCCTGCTGGGGCCCCTGGCCCCGGATGCCTGGTTCTGCCGCTGGTTCCAGC
TGACACCGCCGCGGGGCGGCCACCTCCTCTTCCCCTGCTACCAGTGGCTGGAGGGGGCGGGGACCCTGGT
GCTGCAGGAGGGTACAGCCAAGGTGTCCTGGGCAGACCACCACCCTGTGCTCCAGCAACAGCGCCAGGAG
GAGCTTCAGGCCCGGCAGGAGATGTACCAGTGGAAGGCTTACAACCCAGGTTGGCCTCACTGCCTGGATG
AAAAGACAGTGGAAGACTTGGAGCTCAATATCAAATACTCCACAGCCAAGAATGCCAACTTTTATCTACA
GGCTGGCTCTGCTTTTGCAGAGATGAAAATCAAGGGGTTGCTGGACCGCAAGGGGCTCTGGAGGAGTCTG
AATGAGATGAAAAGGATCTTCAACTTCCGGAGGACCCCAGCAGCTGAGCACGCATTTGAGCACTGGCAGG
AGGACGCCTTCTTCGCCTCCCAGTTCCTGAATGGTCTCAACCCTGTCCTGATCCGCCGCTGTCACTACCT
CCCAAAGAACTTCCCCGTCACTGATGCCATGGTGGCCTCAGTGTTGGGTCCTGGGACCAGCTTGCAGGCT
GAGCTAGAGAAGGGCTCCCTGTTCTTGGTGGATCACGGCATCCTCTCTGGCATCCAGACCAATGTCATTA
ATGGGAAGCCTCAGTTCTCTGCGGCCCCAATGACCCTGCTATACCAGAGCCCAGGCTGCGGGCCGCTGCT
GCCTCTCGCCATCCAGCTCAGCCAGACCCCCGGCCCAAACAGCCCCATCTTCCTGCCCACTGATGACAAG
TGGGACTGGTTGCTGGCCAAGACCTGGGTGCGCAATGCCGAGTTCTCCTTCCATGAGGCCCTCACGCACC
TGCTGCACTCACATCTGCTGCCTGAGGTCTTCACCCTGGCTACCCTGCGTCAGCTGCCCCACTGCCACCC
TCTCTTCAAGTCCACAGGCATCGGCATTGAAGGCTTCTCTGAGTTGATACAGAGGAACATGAAGCAGCTG
AACTATTCTCTCCTGTGTCTGCCTGAGGATATCCGGACCCGAGGAGTTGAAGACATCCCAGGCTACTACT
ACCGTGATGATGGGATGCAGATCTGGGGTGCAGTGGAACGCTTTGTCTCTGAAATCATCGGTATCTACTA
CCCAAGTGATGAGTCTGTCCAAGATGACAGAGAGCTCCAGGCCTGGGTCAGAGAGATCTTCTCCAAGGGC
TTCCTAAACCAGGAGAGCTCAGGTATACCCTCCTCACTGGAGACCCGGGAAGCCCTGGTGCAGTATGTCA
CCATGGTGATATTCACCTGCTCCGCCAAGCATGCGGCTGTCAGTGCAGGGCAGTTTGACTCCTGTGCTTG
GATGCCCAACCTGCCACCCAGCATGCAGCTGCCACCACCCACCTCCAAAGGCCTGGCAACATGCGAGGGC
TTCATAGCCACCCTCCCACCTGTCAATGCCACATGTGATGTCATCCTTGCTCTCTGGTTGCTGAGCAAGG
AGCCTGGAGACCAAAGGCCCCTGGGCACCTATCCGGATGAGCACTTCACAGAGGAGGCCCCTCGGCGGAG
CATCGCCACCTTCCAGAGCCGCCTGGCCCAGATCTCGAGGGGCATCCAGGAGCGGAACCAGGGCCTGGTG
CTGCCCTACACCTACCTAGACCCTCCCCTCATCGAGAACAGCGTCTCCATCTAA

Translation (647 aa):
MAEFRVRVSTGEAFGAGTWDKVSVSIVGTRGESPPLPLDNLGKEFTAGAEEDFQVTLPEDVGRVLLLRVH
KAPPVLPLLGPLAPDAWFCRWFQLTPPRGGHLLFPCYQWLEGAGTLVLQEGTAKVSWADHHPVLQQQRQE
ELQARQEMYQWKAYNPGWPHCLDEKTVEDLELNIKYSTAKNANFYLQAGSAFAEMKIKGLLDRKGLWRSL
NEMKRIFNFRRTPAAEHAFEHWQEDAFFASQFLNGLNPVLIRRCHYLPKNFPVTDAMVASVLGPGTSLQA
ELEKGSLFLVDHGILSGIQTNVINGKPQFSAAPMTLLYQSPGCGPLLPLAIQLSQTPGPNSPIFLPTDDK
WDWLLAKTWVRNAEFSFHEALTHLLHSHLLPEVFTLATLRQLPHCHPLFKSTGIGIEGFSELIQRNMKQL
NYSLLCLPEDIRTRGVEDIPGYYYRDDGMQIWGAVERFVSEIIGIYYPSDESVQDDRELQAWVREIFSKG
FLNQESSGIPSSLETREALVQYVTMVIFTCSAKHAAVSAGQFDSCAWMPNLPPSMQLPPPTSKGLATCEG
FIATLPPVNATCDVILALWLLSKEPGDQRPLGTYPDEHFTEEAPRRSIATFQSRLAQISRGIQERNQGLV
LPYTYLDPPLIENSVSI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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