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Report for CCDS33296.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33296.1 Public Homo sapiens 2 HNMT 24 110 108 CCDS HistoryNCBI Gene:3176Re-query CCDS DB by CCDS ID:33296.1Re-query CCDS DB by GeneID:3176See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33296.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000329366.8 ENSP00000333259.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000329366.8Link to Ensembl Protein Viewer:ENSP00000333259.4Re-query CCDS DB by Nucleotide ID:ENST00000329366Re-query CCDS DB by Protein ID:ENSP00000333259
Original member Current member NCBI NM_001024075.3 NP_001019246.1 Accepted alive Link to Nucleotide Sequence:NM_001024075.3Link to Protein Sequence:NP_001019246.1Re-query CCDS DB by Nucleotide ID:NM_001024075Re-query CCDS DB by Protein ID:NP_001019246Link to BLAST:NP_001019246.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001019246.1 126 P50135-2 126 100% 0 0

Chromosomal Locations for CCDS 33296.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 137964492 137964628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 137970165 137970217 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 137981216 137981406 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (381 nt):
ATGGCATCTTCCATGAGGAGCTTGTTTTCTGACCACGGGAAATATGTTGAATCTTTCCGGAGGTTTCTCA
ACCATTCCACGGAACACCAGTGCATGCAGGAATTCATGGACAAGAAGCTGCCAGGCATAATAGGAAGGAT
TGGAGACACAAAATCAGAAATTAAGATTCTAAGCATAGGCGGAGGTGCAGATTGTCTCATTCGGGGAAGC
TCCAGGGTTCTCAAGCGGAATTCGTGTTTCATTTTGTGTAGCACCCGTCAGAAAGACAAGCCAGGCATGA
GGATCCATGATGAGCGCTCTTCTGAGTTGCCATTTGGAGCTGCCCGTTTAGAAAGCAAATCTGCATTTCC
CTCATTCCTAGTTTCCTTCATCCTCTTTTAA

Translation (126 aa):
MASSMRSLFSDHGKYVESFRRFLNHSTEHQCMQEFMDKKLPGIIGRIGDTKSEIKILSIGGGADCLIRGS
SRVLKRNSCFILCSTRQKDKPGMRIHDERSSELPFGAARLESKSAFPSFLVSFILF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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