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Report for CCDS33360.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33360.1 Public Homo sapiens 2 AOX1 24 110 108 CCDS HistoryNCBI Gene:316Re-query CCDS DB by CCDS ID:33360.1Re-query CCDS DB by GeneID:316See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33360.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000374700.7 ENSP00000363832.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000374700.7Link to Ensembl Protein Viewer:ENSP00000363832.2Re-query CCDS DB by Nucleotide ID:ENST00000374700Re-query CCDS DB by Protein ID:ENSP00000363832
Original member Current member NCBI NM_001159.4 NP_001150.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001159.4Link to Protein Sequence:NP_001150.3Re-query CCDS DB by Nucleotide ID:NM_001159Re-query CCDS DB by Protein ID:NP_001150Link to BLAST:NP_001150.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001150.3 1338 Q06278 1338 100% 0 0

Chromosomal Locations for CCDS 33360.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 200586109 200586153 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200593146 200593203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200595272 200595368 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200597397 200597505 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200599620 200599746 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200602284 200602345 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200603267 200603356 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200604017 200604097 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200604696 200604840 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200605536 200605628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200608984 200609135 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200609321 200609414 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200611384 200611493 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200612609 200612793 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200613804 200613966 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200615971 200616063 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200620650 200620819 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200621120 200621246 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200623861 200623983 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200627353 200627449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200634791 200634915 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200636911 200637044 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200638215 200638302 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200641098 200641184 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200642610 200642801 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200650974 200651201 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200656842 200656937 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200659165 200659293 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200659995 200660069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200661579 200661631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200662855 200662969 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200666687 200666752 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200668615 200668803 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200669575 200669742 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200670629 200670679 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4017 nt):
ATGGACCGGGCGTCCGAGCTGCTCTTCTACGTGAACGGCCGCAAGGTGATAGAAAAAAATGTCGATCCTG
AAACAATGCTGTTGCCTTATTTGAGGAAGAAGCTTCGACTCACAGGAACTAAGTATGGCTGTGGAGGAGG
AGGCTGTGGTGCTTGTACAGTGATGATATCACGATACAACCCCATCACCAAGAGGATAAGGCATCACCCA
GCCAATGCCTGTCTGATTCCCATCTGTTCTCTGTATGGTGCTGCCGTCACCACAGTAGAAGGCATAGGAA
GCACCCACACCAGAATTCATCCTGTTCAGGAGAGGATTGCCAAGTGTCATGGCACCCAGTGTGGCTTCTG
CACACCTGGGATGGTGATGTCCATCTACACGCTGCTCAGGAACCACCCAGAGCCCACTCTGGATCAGTTA
ACTGATGCCCTTGGTGGTAACCTGTGCCGTTGCACTGGATACAGGCCCATAATTGATGCATGCAAGACTT
TCTGTAAAACTTCGGGCTGCTGTCAAAGTAAAGAAAATGGGGTTTGCTGTTTGGATCAAGGAATCAATGG
ATTGCCAGAATTTGAGGAAGGAAGTAAGACAAGTCCAAAACTCTTCGCAGAAGAGGAGTTTCTGCCATTG
GATCCAACCCAGGAACTGATATTTCCTCCTGAGCTAATGATAATGGCTGAGAAACAGTCGCAAAGGACCA
GGGTGTTTGGCAGTGAGAGAATGATGTGGTTTTCCCCCGTGACCCTGAAGGAACTGCTGGAATTTAAATT
CAAGTATCCCCAGGCTCCTGTTATCATGGGAAACACCTCTGTGGGGCCTGAAGTGAAATTTAAAGGCGTC
TTTCACCCAGTTATAATTTCTCCTGATAGAATTGAAGAACTGAGTGTTGTAAACCATGCATATAATGGAC
TCACCCTTGGTGCTGGTCTCAGCCTAGCCCAGGTGAAGGACATTTTGGCTGATGTAGTCCAGAAGCTTCC
AGAGGAGAAGACACAGATGTACCATGCTCTCCTGAAGCATTTGGGAACTCTGGCTGGGTCCCAGATCAGG
AACATGGCTTCTTTAGGGGGACACATCATTAGCAGGCATCCAGATTCAGATCTGAATCCCATCCTGGCTG
TGGGTAACTGTACCCTCAACTTGCTATCAAAAGAAGGAAAACGACAGATTCCTTTAAATGAGCAATTCCT
CAGCAAGTGCCCTAATGCAGATCTTAAGCCTCAAGAAATCTTGGTCTCAGTGAACATCCCCTACTCAAGG
AAGTGGGAATTTGTGTCAGCCTTCCGACAAGCCCAGCGACAGGAGAATGCGCTAGCGATAGTCAATTCAG
GAATGAGAGTCTTTTTTGGAGAAGGGGATGGCATTATTAGAGAGTTATGCATCTCATATGGAGGCGTTGG
TCCAGCCACCATCTGTGCCAAGAATTCCTGCCAGAAACTCATTGGAAGGCACTGGAACGAACAGATGCTG
GATATAGCCTGCAGGCTTATTCTGAATGAAGTCTCCCTTTTGGGCTCGGCGCCAGGTGGGAAAGTGGAGT
TCAAGAGGACTCTCATCATCAGCTTCCTCTTCAAGTTCTACCTGGAAGTGTCACAGATTTTGAAAAAGAT
GGATCCAGTTCACTATCCTAGCCTTGCAGACAAGTATGAAAGTGCTTTAGAAGATCTTCATTCCAAACAT
CACTGCAGTACATTAAAGTACCAGAATATAGGCCCAAAGCAGCATCCTGAAGACCCAATTGGCCACCCCA
TCATGCATCTGTCTGGTGTGAAGCATGCCACGGGGGAGGCCATCTACTGTGATGACATGCCTCTGGTGGA
CCAGGAACTTTTCTTGACTTTTGTGACTAGTTCAAGAGCTCATGCTAAGATTGTGTCTATTGATCTGTCA
GAAGCTCTCAGCATGCCCGGTGTGGTGGACATCATGACAGCAGAACATCTTAGTGACGTCAACTCCTTCT
GCTTTTTTACTGAAGCTGAGAAATTTCTGGCGACAGATAAGGTGTTCTGTGTGGGTCAGCTTGTCTGTGC
TGTGCTTGCCGATTCTGAGGTTCAGGCAAAGCGAGCTGCTAAGCGAGTGAAGATTGTCTATCAAGACTTG
GAGCCGCTGATACTAACAATTGAGGAAAGTATACAACACAACTCCTCCTTCAAGCCAGAAAGGAAACTGG
AATATGGAAATGTTGACGAAGCATTTAAAGTGGTTGATCAAATTCTTGAAGGTGAAATACATATGGGAGG
TCAAGAACATTTTTATATGGAAACCCAAAGCATGCTTGTCGTTCCCAAGGGAGAGGATCAAGAAATGGAT
GTCTACGTGTCCACACAGTTTCCCAAATATATACAGGACATTGTTGCCTCAACCTTGAAGCTCCCAGCTA
ACAAGGTCATGTGCCATGTAAGGCGTGTTGGTGGAGCGTTTGGAGGGAAGGTGTTAAAAACCGGAATCAT
TGCAGCCGTCACTGCATTTGCCGCAAACAAACATGGCCGTGCAGTTCGCTGTGTTCTGGAACGAGGAGAA
GACATGTTAATAACTGGAGGCCGCCATCCTTACCTTGGAAAGTACAAAGCTGGATTCATGAACGATGGCA
GAATCTTGGCCCTGGACATGGAGCATTACAGCAATGCAGGCGCCTCCTTGGATGAATCATTATTCGTGAT
AGAAATGGGACTTCTGAAAATGGACAATGCTTACAAGTTTCCCAATCTCCGCTGCCGGGGTTGGGCATGC
AGAACCAACCTTCCATCCAACACAGCTTTTCGTGGGTTTGGCTTTCCTCAGGCAGCGCTGATCACCGAAT
CTTGTATCACGGAAGTTGCAGCCAAATGTGGACTATCCCCTGAGAAGGTGCGAATCATAAACATGTACAA
GGAAATTGATCAAACACCCTACAAACAAGAGATCAATGCCAAGAACCTAATCCAGTGTTGGAGAGAATGT
ATGGCCATGTCTTCCTACTCCTTGAGGAAAGTTGCTGTGGAAAAGTTCAATGCAGAGAATTATTGGAAGA
AGAAAGGACTGGCCATGGTCCCCCTGAAGTTTCCTGTTGGCCTTGGCTCACGTGCTGCTGGTCAGGCTGC
TGCCTTGGTTCACATTTATCTTGATGGCTCTGTGCTGGTCACTCACGGTGGAATTGAAATGGGGCAGGGG
GTCCACACTAAAATGATTCAGGTGGTCAGCCGTGAATTAAGAATGCCAATGTCGAATGTCCACCTGCGTG
GAACAAGCACAGAAACTGTCCCTAATGCAAATATCTCTGGAGGTTCTGTGGTGGCAGATCTCAACGGTTT
GGCAGTAAAGGATGCCTGTCAAACTCTTCTAAAACGCCTCGAACCCATCATCAGCAAGAATCCTAAAGGA
ACTTGGAAAGACTGGGCACAGACTGCTTTTGATGAAAGCATTAACCTTTCAGCTGTTGGATACTTCAGAG
GTTATGAGTCAGACATGAACTGGGAGAAAGGCGAAGGCCAGCCCTTCGAATACTTTGTTTATGGAGCTGC
CTGTTCCGAGGTTGAAATAGACTGCCTGACGGGGGATCATAAGAACATCAGAACAGACATTGTCATGGAT
GTTGGCTGCAGTATAAATCCAGCCATTGACATAGGCCAGATTGAAGGTGCATTTATTCAAGGCATGGGAC
TTTATACAATAGAGGAACTGAATTATTCTCCCCAGGGCATTCTGCACACTCGTGGTCCAGACCAATATAA
AATCCCTGCCATCTGTGACATGCCCACGGAGTTGCACATTGCTTTGTTGCCTCCTTCTCAAAACTCAAAT
ACTCTTTATTCATCTAAGGGTCTGGGAGAGTCGGGGGTGTTCCTGGGGTGTTCCGTGTTTTTCGCTATCC
ATGACGCAGTGAGTGCAGCACGACAGGAGAGAGGCCTGCATGGACCCTTGACCCTTAATAGTCCACTGAC
CCCGGAGAAGATTAGGATGGCCTGTGAAGACAAGTTCACAAAAATGATTCCGAGAGATGAACCTGGATCC
TACGTTCCTTGGAATGTACCCATCTGA

Translation (1338 aa):
MDRASELLFYVNGRKVIEKNVDPETMLLPYLRKKLRLTGTKYGCGGGGCGACTVMISRYNPITKRIRHHP
ANACLIPICSLYGAAVTTVEGIGSTHTRIHPVQERIAKCHGTQCGFCTPGMVMSIYTLLRNHPEPTLDQL
TDALGGNLCRCTGYRPIIDACKTFCKTSGCCQSKENGVCCLDQGINGLPEFEEGSKTSPKLFAEEEFLPL
DPTQELIFPPELMIMAEKQSQRTRVFGSERMMWFSPVTLKELLEFKFKYPQAPVIMGNTSVGPEVKFKGV
FHPVIISPDRIEELSVVNHAYNGLTLGAGLSLAQVKDILADVVQKLPEEKTQMYHALLKHLGTLAGSQIR
NMASLGGHIISRHPDSDLNPILAVGNCTLNLLSKEGKRQIPLNEQFLSKCPNADLKPQEILVSVNIPYSR
KWEFVSAFRQAQRQENALAIVNSGMRVFFGEGDGIIRELCISYGGVGPATICAKNSCQKLIGRHWNEQML
DIACRLILNEVSLLGSAPGGKVEFKRTLIISFLFKFYLEVSQILKKMDPVHYPSLADKYESALEDLHSKH
HCSTLKYQNIGPKQHPEDPIGHPIMHLSGVKHATGEAIYCDDMPLVDQELFLTFVTSSRAHAKIVSIDLS
EALSMPGVVDIMTAEHLSDVNSFCFFTEAEKFLATDKVFCVGQLVCAVLADSEVQAKRAAKRVKIVYQDL
EPLILTIEESIQHNSSFKPERKLEYGNVDEAFKVVDQILEGEIHMGGQEHFYMETQSMLVVPKGEDQEMD
VYVSTQFPKYIQDIVASTLKLPANKVMCHVRRVGGAFGGKVLKTGIIAAVTAFAANKHGRAVRCVLERGE
DMLITGGRHPYLGKYKAGFMNDGRILALDMEHYSNAGASLDESLFVIEMGLLKMDNAYKFPNLRCRGWAC
RTNLPSNTAFRGFGFPQAALITESCITEVAAKCGLSPEKVRIINMYKEIDQTPYKQEINAKNLIQCWREC
MAMSSYSLRKVAVEKFNAENYWKKKGLAMVPLKFPVGLGSRAAGQAAALVHIYLDGSVLVTHGGIEMGQG
VHTKMIQVVSRELRMPMSNVHLRGTSTETVPNANISGGSVVADLNGLAVKDACQTLLKRLEPIISKNPKG
TWKDWAQTAFDESINLSAVGYFRGYESDMNWEKGEGQPFEYFVYGAACSEVEIDCLTGDHKNIRTDIVMD
VGCSINPAIDIGQIEGAFIQGMGLYTIEELNYSPQGILHTRGPDQYKIPAICDMPTELHIALLPPSQNSN
TLYSSKGLGESGVFLGCSVFFAIHDAVSAARQERGLHGPLTLNSPLTPEKIRMACEDKFTKMIPRDEPGS
YVPWNVPI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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